Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02579 ATGGCCCTGTGTGTTGCTAGGGACATAGATGCACTTTCTCGGGACACTGTTCCGTATGGTAAAAACTACCCTATGCCCGTTTTTGCAGCAGAGATTTTAGGATTTGGATTAGGACTGGTGGCGAACGGGAACTTCGAGTTGGGTCCAAAGGCGTCGGATCTGAAAGGGACGGTGGTGGTGGGAGGCAGCAAGTCGATTCCAGAATGGGAGATATCGGGGTTCGTGGAGTACATAAAGTCGGGGCAGAAGCAGGGGGACATGCTGCTGGTGGTGCCGGAGGGAGCGTATGCGGTGCGGCTGGGGAACGAGGCGTCGATAAAGCAGAACATAAAGGTGCTGAAGGGGATGTACTACTCGATCACGTTCATGGTGGCTCGGACGTGCGCGCAGGAGGAGAGGATTAACATCTCGGTGACGCCGGACTGGGGAGTGATACCGATCCAGACGTTGTACACGAGCAGCGGGTGGGACCCGATTGCGTTCGGGTTCAAAGCGGAGAGCGAGACGGTGGAGATGCTGATTCACAACCCTGGCAAGGAGGAGGACCCCGCCTGTGGGCCCCTCATTGATTCGGTTGCTCTCAGGACTCTCTATCCTCCCAGACCTACAAACCAGAACTTATTGAAGAATGGTGGTTTTGAAGAAGGACCGTATGTGTTTCCGAACTCATCATGGGGTGTGATAATCCCACCGAACATTGAGGATGATCATTCTCCTCTCCCAGGGTGGATGGTGGAGTCGTTGAAGGCAGTGAAGTACATAGACTCAGAGCATTTCTCAGTCCCTCAGGGCACAAGAGCAGTGGAGCTAATAGCAGGAAAAGAGAGTGCGATTGCTCAAGTGGCCAGAACCATCCCTGGCAAAACCTATGTGCTCTCATTCTCTGTAGGGGATGCCAGCAACTCCTGTGAAGGCTCCATGATTGTGGAAGCATTTGCAGGCAAAGACACCATAAAAGTGCCCTACGAATCCAAGGGCAAAGGAGGCTTCAAACGTGCAGCCCTTAAGTTTGTGGCTGTTGGACCAAGAACAAGAATCATGTTCCTCAGCACCTTTTACACTATGAGAAGTGATGATTTCTCTTCACTCTGTGGACCTGTGGTTGATGATGTCAAGTTGATAAGCCTCCGTAAACCATAA 1140 0.5211 MALCVARDIDALSRDTVPYGKNYPMPVFAAEILGFGLGLVANGNFELGPKASDLKGTVVVGGSKSIPEWEISGFVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQNIKVLKGMYYSITFMVARTCAQEERINISVTPDWGVIPIQTLYTSSGWDPIAFGFKAESETVEMLIHNPGKEEDPACGPLIDSVALRTLYPPRPTNQNLLKNGGFEEGPYVFPNSSWGVIIPPNIEDDHSPLPGWMVESLKAVKYIDSEHFSVPQGTRAVELIAGKESAIAQVARTIPGKTYVLSFSVGDASNSCEGSMIVEAFAGKDTIKVPYESKGKGGFKRAALKFVAVGPRTRIMFLSTFYTMRSDDFSSLCGPVVDDVKLISLRKP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02579 379 Gene3D - 202 374 - -
Vimu1g02579 379 Gene3D - 38 195 - -
Vimu1g02579 379 SUPERFAMILY Galactose-binding domain-like 38 195 IPR008979 -
Vimu1g02579 379 FunFam DUF642 family protein 202 373 - -
Vimu1g02579 379 PANTHER OS02G0527500 PROTEIN-RELATED 33 375 - -
Vimu1g02579 379 Pfam Protein of unknown function (DUF642) 206 373 IPR006946 -
Vimu1g02579 379 Pfam Protein of unknown function (DUF642) 38 195 IPR006946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02579 Vimu-Chr1 37295379 37300999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02579 - - gmx:100776765 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02579 1 37295379 37300999 Vimu1g02579 1 37295379 37300999 ECH