Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02575 ATGCGACGCACTCCTCCCTCCCTCCATTTCCTCTCCGCCACTGACACCGCCACCGCCGCCAACACTGCAGCAGCCACCGCCGCCTCGATGTCTTCACGCCCATCCCACCGAGGGCGCGGTAGGGGCTTCTCCAGCCGCCCGTACTCCGGCGACAGAGGTCACTTCGTCTCCGGCGATGCGCACTTACGCTCTGTCCGCGACGCCAATTTAGGTCTCCGGCGAGGTGAGAGTGGAAGCTTCGCGAACCAAACGCTGCATAATCAGAATCCCCCGTATAATCGGAGGCCTCATCCGCCGCCGCTTCACCAAGAGCGGCCTCAGTTCCGTAATCGACCGTATTCCCCGCATTTTCGGCCACATTTCCCGCAGTACCGGCAACATCCTCCACCTGAGCACCGGCCGATGTTTCGTCCGCAGACGCATCTCCGGCAGCGGCCGCCGGATTATCGGGACTGGGAGCCTTCCCTGACGCCGCCTCCTCCTCATTGTGAGCGGTTTAAAGTTCTTTCCTATAATATATTGGCTGACTACCTTGCTTTGGACCACCGGAACAAACTTTATTTTCACATACCTCCATACATCTTGGATTGGCAGTGGAGAAAGAGAAGCATACTTTTTGAGTTGGGGCTGTGGTCAGCTGATATCTTATGTTTACAGGAGGTTGATAGATTTCATGAGTTGGCAGAGGAGTTGCAGCCTAAGGGATACAGTGGCATCTGGAAGATGCGTACAGGTAATCCAGTTGATGGCTGTGCAATATTTTGGAAAAAATCAAGGTTCAATTTGTTATATGAAGAATGCATTGAGTTTAATAAGCTGGGACTCAGGGACAATGTCGCTCAGCTATGTGTACTAGAGATCATTTATCGAAATGGATCTCTCCCATCCAGAAATGGCCAGGCTCAGCCACAATATTGGCAAGCTGTGGGTTTTAAACCCTATAATGTTTCTGTTGCTAAAGGATGGGTGCAGCATTTGAGTTGTTGCAATATTGGCCGTGATCATATCTGTTCCCCCAAAACAGAGAGCACTGGGCATCCTATAGTAGCCTCAAGCCACTCTGCTCTGATATGGTGCTTGACAGGCTCTAGTAAAGTTGTGGTTTGTAACATTCATGTGCTTTACAATCCTAACAGGGGAGAAATTAAGCTTGGCCAGGTTCGTGTGCTACTTGATAAGGCTAAAGCTGTTTCTAAACTCTGGAATGATGCCCCTATAGTTATATGTGGGGATTTTAATTGTACACCCAAGAGTCCGTTATACAACTTTATATCGGAACAGAAGTTAGATCTATCCGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCAATTCCTGCATCAAAGCCCTATTATGGTCCTAATTCTGGTGAAATATCTGCTACTGGTTCAGTTCAGGCTATATCCACTGAAGGTGTCAAGGAAGTTACTGAACAAAATAATTATCGATTGGACACGACAGACCTGGATATTTCTGTTAAGCCTTGTGCACATGTTGAGTGTGGAAAGGAAAATGATTCATATGCAGGAAAAGATACTCAGGAAACTGCTGTTGACCATTCAAAGATCTTTTGTGAAGTTGGTAGCATAGAAGAACAAGATGCTTCTTATAGTAAAGGTGGGCTCCATATTGTTCCTGTAAATGGTGATGTTCATGACATTACACCTGTGACCTCTTCAGCTCCTGAAGCTGTTAACAGTGAAACAACTGGGTTGGGAAGCAATGAACATATACCAGATGCTGTCCCAACTTCAAATGAAGAATTAAGCAACAAATCCAACTTACATGTCTCTGAAGAGAATAAACTGGTGGAGTTTGACTGTTCCCCAACTTCTCTTCAGGAATGTCATCAATCTTTCACAAGGGTGAGGATTGATCTTGATTCAACAGATCTTGACAATGCAGTAATTTCTCCAACTAAACCATCCAGCCAAACTTCAGCTTCCAATACATTGGAAGTCATTAGTACAGAGTATGGAGATAGCCCATCTCATGAGGAAATTGCTGATGACCAAAATAAAAGCTCATCAACTGCATATCTAGGTGATAAATCGCATCAAAACTTTCCAGTTAATGAAAAAGAGAAGACATTCTTTGATGAGATAGATAAAACCATCGGTGAAAATATTGGTGATGACAGCAGTTTTGTATCTTCCTTACATAATGCTGAAGGAGTTGCTCTTGACATCAGTTCATCAATGAAGTCAGATCGTGATAAGTCCTATCAGTACACGAAATTAAATTCTGCTTCCAATTTGTTGCCTGTAGAAGAAGGCAATGAAGGGGAGGATAAGTTGTCTCCTCGTCAGATTTCTAAATCTATTTGGGAAGAGGAGGCTACTTATAATCCTGCATTGTGGACCCCTAAGGAGATAGAAACTGCAACAGGAAATGAAGATTGCACCTTTTTGGAGCACCCTTTACAGCTTAGGAGCACATACAGCGAGGCAATGGATTGTTCAGGGACCAGAGACCCCTACGGAGAACCCCTTGTGACCAGTTATCACAGGCGCTTCTCAGGAACTGTTGACTACATTTGGCGATCTGAAGGTCTTCAAACAATCAGAGTTCTTGCTCCGATGGCTAAACATGCCATGGAATGGACTCCAGGATTCCCAACGAAGGTCGGAAGGATAGACACAGCCCATGATCCCTCTGATTCAACAACCTTCATTGTGATCTCGCTGCTATCTGTTCCTCCTGCAATCCAGTGTCTACCTCAGCTCGTGGTGTTCTTCGTACTTAAATGGGGCAGTGATCATATTGCATTGGTGACCGAGCTGGCTTTCGTGAAAGATGGTACCGACATCTCCACCAAGGTTTAA 2829 0.456 MRRTPPSLHFLSATDTATAANTAAATAASMSSRPSHRGRGRGFSSRPYSGDRGHFVSGDAHLRSVRDANLGLRRGESGSFANQTLHNQNPPYNRRPHPPPLHQERPQFRNRPYSPHFRPHFPQYRQHPPPEHRPMFRPQTHLRQRPPDYRDWEPSLTPPPPHCERFKVLSYNILADYLALDHRNKLYFHIPPYILDWQWRKRSILFELGLWSADILCLQEVDRFHELAEELQPKGYSGIWKMRTGNPVDGCAIFWKKSRFNLLYEECIEFNKLGLRDNVAQLCVLEIIYRNGSLPSRNGQAQPQYWQAVGFKPYNVSVAKGWVQHLSCCNIGRDHICSPKTESTGHPIVASSHSALIWCLTGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSKLWNDAPIVICGDFNCTPKSPLYNFISEQKLDLSGIDRNKVSGQASAIPASKPYYGPNSGEISATGSVQAISTEGVKEVTEQNNYRLDTTDLDISVKPCAHVECGKENDSYAGKDTQETAVDHSKIFCEVGSIEEQDASYSKGGLHIVPVNGDVHDITPVTSSAPEAVNSETTGLGSNEHIPDAVPTSNEELSNKSNLHVSEENKLVEFDCSPTSLQECHQSFTRVRIDLDSTDLDNAVISPTKPSSQTSASNTLEVISTEYGDSPSHEEIADDQNKSSSTAYLGDKSHQNFPVNEKEKTFFDEIDKTIGENIGDDSSFVSSLHNAEGVALDISSSMKSDRDKSYQYTKLNSASNLLPVEEGNEGEDKLSPRQISKSIWEEEATYNPALWTPKEIETATGNEDCTFLEHPLQLRSTYSEAMDCSGTRDPYGEPLVTSYHRRFSGTVDYIWRSEGLQTIRVLAPMAKHAMEWTPGFPTKVGRIDTAHDPSDSTTFIVISLLSVPPAIQCLPQLVVFFVLKWGSDHIALVTELAFVKDGTDISTKV 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02575 942 SUPERFAMILY DNase I-like 154 430 IPR036691 -
Vimu1g02575 942 MobiDBLite consensus disorder prediction 74 107 - -
Vimu1g02575 942 MobiDBLite consensus disorder prediction 22 60 - -
Vimu1g02575 942 MobiDBLite consensus disorder prediction 125 143 - -
Vimu1g02575 942 Gene3D Endonuclease/exonuclease/phosphatase 765 939 IPR036691 -
Vimu1g02575 942 MobiDBLite consensus disorder prediction 661 688 - -
Vimu1g02575 942 MobiDBLite consensus disorder prediction 76 91 - -
Vimu1g02575 942 MobiDBLite consensus disorder prediction 123 143 - -
Vimu1g02575 942 Pfam Endonuclease/Exonuclease/phosphatase family 169 432 IPR005135 GO:0003824
Vimu1g02575 942 Gene3D Endonuclease/exonuclease/phosphatase 139 483 IPR036691 -
Vimu1g02575 942 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 99 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02575 Vimu-Chr1 37184574 37201792 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02575 - - vun:114194208 954.896