Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02571 ATGAAGAAGAACAGCCAGAGTAGCATAGAAAAAATGGTTGGTGAAGGAGAAAGAGGAAAGGCAGTGATAGTGGGAGGAAGCATAGCAGGTATATCATGTGCACATGCTCTTATCTTAGCTGGTTGGGATGTCCTCGTGCTTGAGAAAACACCTTCGTCTCCAACTGGAAGCCCCACTGGTGCTGGTCTTGGACTCAACTCTTTCTCCCAACAAATCATTCAATCATGGCTTCCACACTCACAACGACACCTCCTACTCAACACCACTCTGCCTCTAACCATTGATCAGAACTATGTAACTGATAGTGAGAGGAAGGTTCACAGTACACTGACAAGGGATGAGAGTTTGAACTTCAGAGCAGCACATTGGGCAGATCTTCATGGCCTTCTGTACAATGCACTGCCATCAGATATATTTTTATGGGGTCATCTTTTTCTCTCTTTCCATGTTGTACATGATAAGGGTTGTGTCATAGTAAAGGCTAAGGTTCTAGAAACTGGTGAGGTTGTGGAGATAGAAGGGGATTTGCTTGTTGCGGCAGATGGTTGTCTCTCTTCCATCCGTCAAAAATATCTCCCTGATTTTAAACTGAGATATTCAGGCTATTGTGCATGGAGAGGGGTTCTTGATTTTTCGAAAATTGAGAATTCAGAAGCCATCAGTGGTATCAGAAAGGCATACCCTGATCTAGGAAAATGCTTGTACTTTGACTTGGCCTCAGGTTCACACACTGTGCTGTATGAGCTGCACAAAAAAAGACTCAATTGGGTTTGGTTTGTGAATCAGCCTGAGCCTGAAGTTAAGGGGACATCAGTGACAACGAAGGTAAATAGTGAGATGATCCAGAAGATGCAGCAAGAGGCAGAAAAGGTTTTGATTCCTGAATTGGTAAAGGTCATAAAAGAAACAAGGGAACCTTTCTTGAATTTCATATATGATAGTGATCCCTTGGAGAAGATCTTTTGGGAGAAAGTGGTATTGGTAGGGGATGCAGCTCATCCCACTACTCCTCACTGTGTTAGAAGCACAAACATGTCCATATTAGATGCAGCTGTGTTAGGAAAATGCATAGAGAAGTGGGGAGCACAAAAGCTTGAATCAGCTTTGGAAGAGTATCAGTTGATTAGGCTACCACTCACCTCAAAGCAAGTTCTTCATGCTAGGAGTCTAGGTCGTTTGAAACAAGGGTTTGTTCTACCTGATAGAGAACCTTTTGACCCAAAGTTGGTTAGGCCAGAGGATCATCAGGAGCTTCTAGTGAGGAACACACCATTTTTTAATGATGGCCCTTTATCACTTGGTCTAATACCATCTGATTGCTTGTAG 1326 0.4306 MKKNSQSSIEKMVGEGERGKAVIVGGSIAGISCAHALILAGWDVLVLEKTPSSPTGSPTGAGLGLNSFSQQIIQSWLPHSQRHLLLNTTLPLTIDQNYVTDSERKVHSTLTRDESLNFRAAHWADLHGLLYNALPSDIFLWGHLFLSFHVVHDKGCVIVKAKVLETGEVVEIEGDLLVAADGCLSSIRQKYLPDFKLRYSGYCAWRGVLDFSKIENSEAISGIRKAYPDLGKCLYFDLASGSHTVLYELHKKRLNWVWFVNQPEPEVKGTSVTTKVNSEMIQKMQQEAEKVLIPELVKVIKETREPFLNFIYDSDPLEKIFWEKVVLVGDAAHPTTPHCVRSTNMSILDAAVLGKCIEKWGAQKLESALEEYQLIRLPLTSKQVLHARSLGRLKQGFVLPDREPFDPKLVRPEDHQELLVRNTPFFNDGPLSLGLIPSDCL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02571 441 Gene3D - 20 398 IPR036188 -
Vimu1g02571 441 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Vimu1g02571 441 Pfam FAD binding domain 151 381 IPR002938 GO:0071949
Vimu1g02571 441 PANTHER MONOOXYGENASE-LIKE 18 428 - -
Vimu1g02571 441 SUPERFAMILY FAD/NAD(P)-binding domain 21 397 IPR036188 -
Vimu1g02571 441 SUPERFAMILY FAD-linked reductases, C-terminal domain 198 313 - -
Vimu1g02571 441 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 - -
Vimu1g02571 441 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 353 - -
Vimu1g02571 441 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 20 42 - -
Vimu1g02571 441 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 173 188 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02571 - - vra:106763074 845.114