Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02567 ATGGCCTCAGAAATAAGGTACATCTGCAAAAGAACTGTGGTGAGCAGCAAGGCAGTGGAGCCAGGAAAGTACTTTCCCTTATCAGCTTTGGATCATCACATGCAGCACAACCACATTAGGTTGGTCTGTTATTACCAAGGTTCAGGAGAAGCATTGGAGCTTGGAGAAATAACCAAGAAGTTGAGAGAGAGTTTGTCAGAAATGCTGACCCATTTCCCCATGGTGACTGGAAGGTTGACAAAAGATGAAATAGGGCATTGGAAGATCAAATGCAATGATGCAGGACTGAGAGTGGTGGAGGCCAAAGCAAAAGGAACTCTGCAACAATGGCTACCAAATCTTCATAGAGAAAAGGAACTCCAACTTGTGCATTGGGAGGACATGTTCCACAAACCTTATTATTGGTCCACATTTTATGTTCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATAGGCCTAAGCTGTGTTCATCTCTTGGCAGATTCCACTTCTGCAATCTCATTCATGAAAGCATGGGCTGATATTTCAATGGGTGATAAAATCATTACTCCTCCATTATTCCACCCTTTATTACCTCTCACAAGACATGCAAACACAAACCCCAATCATCACCACCACATGGAGTTAATACACCACTACAAATCTATAATTGGAAAAAAACCCATTTCCTTCAAGGAAGCAAGGTACACTACCATTTCCCTGGGCTTCTCAGCCCAAATGGTTCAGGCCTGCATGTCCATGGCCCAATTCAACAGCCCAATAACACCCTTTGAGGCCCTGGCAGCATTGTTTTGGGTCTCTTTGAGTAAAGTCAGGGGCTTGAGAAATGGGCTTGTTGACATGTCCATATGCTTGGACATGAGAAAAGTGTTGGGCCTGGATACTGGGTTCTTTGGGAACTGCATGGTGTATAATAAGGTCCATGAAGTAGAAGGGGAGAATCAGAAATTGAGATTTGGAGAAGCTGTTAGAGCAATAAGTGATGTTGTGGGTAGAATGAACTATAAGGGTGTGATGGATTTGATTGAGTGGCTAGAAAATGATGATGTGAATTCACCTACCATGATGAACGGCCATGATCTTGTTTGTACTAGCTTGGAGGGTGTGGACCCTTACTTTGTGTTTGAAAATGGGTTGAAACCCATTCATGTTTCTTGTTATGTGGAACCAGTTTTGGGAGAAGGACAGGTTCTGATACTCCCTGGCCCACCTGGGGAGGGTCCCTTAAGCAGAGTGGCTATGGTGACCTTAAGAGAAGAGGAAGCAACTAAACTTTGTAAGGATGAACTTATCTCACAATTCTCTCCTACTACCCTAATGAAATTTCAATGA 1335 0.433 MASEIRYICKRTVVSSKAVEPGKYFPLSALDHHMQHNHIRLVCYYQGSGEALELGEITKKLRESLSEMLTHFPMVTGRLTKDEIGHWKIKCNDAGLRVVEAKAKGTLQQWLPNLHREKELQLVHWEDMFHKPYYWSTFYVQLTEFEEGGLAIGLSCVHLLADSTSAISFMKAWADISMGDKIITPPLFHPLLPLTRHANTNPNHHHHMELIHHYKSIIGKKPISFKEARYTTISLGFSAQMVQACMSMAQFNSPITPFEALAALFWVSLSKVRGLRNGLVDMSICLDMRKVLGLDTGFFGNCMVYNKVHEVEGENQKLRFGEAVRAISDVVGRMNYKGVMDLIEWLENDDVNSPTMMNGHDLVCTSLEGVDPYFVFENGLKPIHVSCYVEPVLGEGQVLILPGPPGEGPLSRVAMVTLREEEATKLCKDELISQFSPTTLMKFQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02567 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 421 - -
Vimu1g02567 444 Gene3D - 219 428 IPR023213 -
Vimu1g02567 444 Gene3D - 4 210 IPR023213 -
Vimu1g02567 444 Pfam Transferase family 9 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02567 Vimu-Chr1 37120497 37121924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02567 12 403 Acyl Lipid Metabolism Gene Families AT3G23840 25.510 3.80e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02567 - - gmx:100804090 647.506