Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02549 ATGGCTTCCATGAATTTGTTCACCACCATTTCCCTCGCCGCGGACAGCCGGAATTCCACCGCCTATTTTCCCCGGAGGCGGGCCAACTCCGTCGCTCTGGCCGGCACTTCGCCGGAATCTCCTCCGGAAATAGATCTCGAGTTCATCGGGCCGAAATCGGGGAGTGATGGGAAGTATCCGGTGGAAAAAGCAAAAGCGATAAGCGGGGAGAAGCTGTTGAGGAACATCATGACGGATAACAAGATCGAGCTTTACGCCACCTACGGGAAACTGATGAACTGCGGAGGAGGAGGTAGCTGTGGAACTTGCATCGTAGAGATTATTGAAGGAAAAGATCTTTTAAATGAAAGAACCAATACGGAACTCAGATATCTCAAGAAGGCATGTTTGCTCTCCCTCTCAAATTCATTACACAAGAACAAACCTGAATCTTGGAGGTTGGCTTGTCAAACTATTGTTGGAAACAAAGAAAACTCTGGCAAGGTATCTTTCAAATTCAAGCTTCACTTTAAATAA 516 0.4709 MASMNLFTTISLAADSRNSTAYFPRRRANSVALAGTSPESPPEIDLEFIGPKSGSDGKYPVEKAKAISGEKLLRNIMTDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELRYLKKACLLSLSNSLHKNKPESWRLACQTIVGNKENSGKVSFKFKLHFK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02549 171 Gene3D - 57 167 IPR012675 -
Vimu1g02549 171 Pfam 2Fe-2S iron-sulfur cluster binding domain 91 153 IPR001041 GO:0051536
Vimu1g02549 171 PANTHER FERREDOXIN/ADRENODOXIN 25 162 IPR001055 GO:0051537|GO:0140647
Vimu1g02549 171 SUPERFAMILY 2Fe-2S ferredoxin-like 68 154 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02549 Vimu-Chr1 36909468 36913493 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02549 - - gmx:100807125 249.595