Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02523 ATGGAAGTGGATTTTGGATCTGAAGAGCACGCTTCCATTGTGTATGCTGCCTTAGCAGTTGATAAAGAGTTGCAACCTGATAAAGTAAAACGAGGCATGACAGTGTCAGATGGAAAGCTGTCAGTGCACTTTGAGGCAACAGAAGCCAGATTTCTGCGGGCATCATTTAGTGCTTTTGTAGATGTCCTGACGCTAGCTACAAAAACTATTGAACAATTTGGCCAAGAAATGAAGTTGACATCGTGGTTGGAGAGGCAAGCCAATTTGGATTTGGCAGAGCAGCAACAAAACGGTTTTGGCAGCAAAGGGCGGGGGGCTACGATTGAGCACACTGGCAAAGGAGAAAGGTTGACCAAGAGTGACCGAGGTTCTTCAGAGAAACAGAGGAAGGAAGTATCAAGAGGGGTTAGGGGTGGTCGCAGTGAGGATTTAACAGCGAGGTAA 444 0.4662 MEVDFGSEEHASIVYAALAVDKELQPDKVKRGMTVSDGKLSVHFEATEARFLRASFSAFVDVLTLATKTIEQFGQEMKLTSWLERQANLDLAEQQQNGFGSKGRGATIEHTGKGERLTKSDRGSSEKQRKEVSRGVRGGRSEDLTAR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02523 147 PANTHER EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER 1 78 IPR015419 -
Vimu1g02523 147 FunFam L antigen family member 3 1 75 - -
Vimu1g02523 147 MobiDBLite consensus disorder prediction 108 147 - -
Vimu1g02523 147 Pfam Transcription factor Pcc1 2 71 IPR015419 -
Vimu1g02523 147 Gene3D - 1 78 - -
Vimu1g02523 147 MobiDBLite consensus disorder prediction 93 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02523 Vimu-Chr1 36587040 36592470 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02523 K15902 - gmx:100527271 139.043