Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02512 ATGCGTATATTATCAGTGGGGAAGAAGCGATCACCTGGACTTCAACTCATGGTTGATGAGTATCGACAACTTCATTGTCTCATTGTGGGGAAGAAGCGATCACCTGGACTTCAACTCATGGTTGATGAGTATCGACAACTTCATTGTCTCATTGGTGTGTTGTTTAGTAGTACTAGAAGAGCACTTCCTATGCGTATATTATCAGTGGGGAAGAAGCGATCACCTGGACTTCAACTCATGGTTGATGAGTATCGACAACTTCATTGTCTCATTGGTGTGTTGTTTAGTAGTACTAGAAGAGCACTTCCTATGCGTATATTATCAATGGGGAAGAAGGGATCACCTGGACTTCAACTCATGGTTGATGAGTATCGACAACTTCGTTGTCTCATTGGTGTGTTGTTTAGTAGTACTAGAAGAGCACTTCCTATGCGTATATTATCAGTGGGGAAGAAGCGATCACCTGGACTTGAACTCATGGTTGATGAGTATCGACAACTTCATTGTCTCATTGGTGTCTTGTTTAGTAGTACTAGAAGAGCACTTCCTATACGTATATTATCAGTGGGGAAGAAGCGATCACCCGGACTTCAACTCATGGTTGATGAGTATGTTGATAAGCTCAGGTACTATTGCAATGTCGAGGACGTTCAAATTCGGACAAATCCTCGAAATGCGCGTGACCAAAGGGCTCAGGTTGATGCTGAAGATGAGGCAGTGATGAACCTTATAAGGTCTGATGACTGGGTTGTGATGTTGGATGAACGTGGGCTAGACATAGGATCTGAGCAAATGGCAGAGTTAGTGGGTGGTGCAGGAAATACTGGTGCTTCTCGGATATCTTTTTGTATTGGTGGTCCCTATGGTCATGGAAGAAAAATAAAGGAACGGGCTAACTTATCAATCAAGTTATCTTCACTGGTCTTAAATCACCAAATAGCATTACTTGTACTTATGGAACAGCTTTACAGGTCTTGGACAATTTTAAAAGGACAAAAGTACCACCATTAG 1011 0.4224 MRILSVGKKRSPGLQLMVDEYRQLHCLIVGKKRSPGLQLMVDEYRQLHCLIGVLFSSTRRALPMRILSVGKKRSPGLQLMVDEYRQLHCLIGVLFSSTRRALPMRILSMGKKGSPGLQLMVDEYRQLRCLIGVLFSSTRRALPMRILSVGKKRSPGLELMVDEYRQLHCLIGVLFSSTRRALPIRILSVGKKRSPGLQLMVDEYVDKLRYYCNVEDVQIRTNPRNARDQRAQVDAEDEAVMNLIRSDDWVVMLDERGLDIGSEQMAELVGGAGNTGASRISFCIGGPYGHGRKIKERANLSIKLSSLVLNHQIALLVLMEQLYRSWTILKGQKYHH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02512 336 SUPERFAMILY alpha/beta knot 183 334 IPR029028 -
Vimu1g02512 336 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 182 336 IPR003742 GO:0006364|GO:0008168
Vimu1g02512 336 Gene3D - 183 336 IPR029026 -
Vimu1g02512 336 Pfam Predicted SPOUT methyltransferase 184 335 IPR003742 GO:0006364|GO:0008168
Vimu1g02512 336 CDD RlmH-like 184 336 IPR003742 GO:0006364|GO:0008168
Vimu1g02512 336 PANTHER METHYLTRANSFERASE 57 85 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02512 K00783 - gmx:100796609 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02512 1 36450077 36453871 Vimu1g02512 1 36450077 36453871 ECH