Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02503 ATGAGTTTGAAAAGCTCTTCTCTTCTCTGCATAGCGCTTCTGCTTGCATTGTCTTCAACTATTAATGGCTTTAACATCACAGAGATGTTGGAAAAGTATCCAGAGCTGTCCTCATTCAACAAGTACATCACCGAATCCAAGCTTGCAGACCAAATAAACAGCCGCAACACCATCACTGTTCTTGCTGTTGAGAACGGCGCCATTTCTTCAATTTCTGGAAAAACCCCAGAAGTCATTAAGGCCGTCATCGGCACCCACATCATCCTTGACTACTATGATGAGAAGAAGCTCATGGAAGTTCAAGCTAGCAGCGCCCAGTTGACAACCCTCTACCAGTCCACAGGCCTTGCCGTCAACCAACAAGGCTTTGTCAACGTTTCACTCATCGGCGAGGGCGAAATCGCCTTCAGCCCCGCCGGCACTTCCGACTACTCCGAGCTCGTCAAGACCGTCACCACCCAGCCCTACAACATCTCCATTCTTCAAATCACCAAGCCCCTCATCGCCCCAGGTATTGACAATCAAACCAAATCTGCACAGTCACCACAACAAGCCAAGGCACCAGCTCCCTCAACAAAGAGTGCCAAAGCACCTGCTCCTTCGACAGGGAGTGCCAAAGCACCCGCAACGAAAGACGGTGCCAAGGCACCAGCTCCGGCGGAGGATGCAAAATCTCCTACTGCAGCTGAGGCACCAGCTCCTTCGGAAGCTGCGGCCGCGCCTTCACCTGCCGAGTCTCCTAAAGCTGATGCCCCAGCAGTAGCTGATGCCCCAGCAGATGGTCCCGCTGCTGATGGTGCTGCAGATACTGCAAGCTCCTCTTCCACCATTAAGATGAGCTTGGTTGGATCAGTGATGGCCTTCGCTTCACTCTTGATCGTTCTATAA 888 0.5203 MSLKSSSLLCIALLLALSSTINGFNITEMLEKYPELSSFNKYITESKLADQINSRNTITVLAVENGAISSISGKTPEVIKAVIGTHIILDYYDEKKLMEVQASSAQLTTLYQSTGLAVNQQGFVNVSLIGEGEIAFSPAGTSDYSELVKTVTTQPYNISILQITKPLIAPGIDNQTKSAQSPQQAKAPAPSTKSAKAPAPSTGSAKAPATKDGAKAPAPAEDAKSPTAAEAPAPSEAAAAPSPAESPKADAPAVADAPADGPAADGAADTASSSSTIKMSLVGSVMAFASLLIVL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02503 295 SUPERFAMILY FAS1 domain 30 170 IPR036378 -
Vimu1g02503 295 Gene3D FAS1 domain 23 167 IPR036378 -
Vimu1g02503 295 MobiDBLite consensus disorder prediction 172 199 - -
Vimu1g02503 295 MobiDBLite consensus disorder prediction 172 274 - -
Vimu1g02503 295 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 277 IPR033254 -
Vimu1g02503 295 FunFam Fasciclin-like arabinogalactan protein 3 23 167 - -
Vimu1g02503 295 ProSiteProfiles FAS1/BIgH3 domain profile. 23 148 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02503 Vimu-Chr1 36372250 36373448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02503 - - vun:114195537 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02503 1 36372250 36373448 Vimu1g02503 1 36372250 36373448 ECH