Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02499 ATGGATTCCATCTACGCGAGCTCCTCCTGCACGGTTCCCCACCTTCTCCGTCGCGACACTCTGCTCTTGCTGCCGCGAACCTCGAATTTCACTGCTCCATATTCGCTTCAGCGGACGAAAAGGGCGCGGCGCGTGCGGATTTCGAGTTCCGCAGCGACGAACGGCGCCGTTTCGAGGGCGCTTCAGGCAGTGAGCAGCACTGCGCTGGAGCAGCTCGATATCGAGCGTGGCGTCTGCATCCCTTTCCGCAAGTACTCGCCCGAGATCGTACCTGCTGCTTGCTGCTATTTGGGATTTAAAACATTGTTTGAGAATACAAATCCAATAAAAGGGGTGAGAAATAAGGTGTTGGAATCAAGAGGATCCACTTTGTCACTTATGTTGCGGGGAGTGGAGATAGTTTGGAATCTGGGCTTGTACTGGTCTAACTTGGTGTATGATTTCTTGGTTGGAAGGGATGAAGAGGTTGTTCCATATCGTGCTCGACAACTTAGGAACCTCTTGTGTGATCTGGGGCCTTCCTTCATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCTGATATCATTCGAGAAGATTATATGAATGAACTCTGCATCCTTCAAGATGATGTTCCTTCATTTCCCAATCAAATTGCCTTCAGAATCATAGAGGAGGATCTGGGTCAACCCCTTGAAGCTGTTTTCAGCAAAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGAGCAACATTGCGTGCCACTGGCGAAGATGTTGCTATCAAGGTTCAGAGGCCTGGGATAGAGCCTATTATATATCGGGATCTTTTCTTATTCCGCACTCTGGCTTCATTTTTAAATGGCATCAGTATGCAGAAGCTGGGATGTAACGCTGAGCTGATTGTTGATGAATTCGGTGAAAAGCTTTTGGAAGAGCTTGATTATACCCTGGAGGCCCGAAATCTTGAAGACTTCCTGGAGAATTTTAAAAATGACCCTACTGTCAAAATTCCCAGGGTTTACAAACAATTTTCTGGTCCTCGTGTGCTGGTAATGGAATGGATTGATGGTATCAGGTGTACCAATCCACAGGCTATCAAAGAAGCTGGTATTGATGTAGATGGATTTTTAACAATTGGAGTGAGTGCTGCCCTACGACAATTGTTGGAATTTGGACTATTTCACGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGGCGAATTGCATATGTGGACTTTGGCAATGTCGCTGTTCTCAGTCAGCAAAATAAACAGATTTTAATTGATGCTGTTGTCCACGCTGTGAATGAGGACTATGCTGAAATGGCTAATGATTTCACCAGATTAGGCTTCCTGTCACCAGGGACTGATGTTACTCCTATAATTCCTGCTTTGGAAGCAATTTGGCAGAACTCTGCAGGAAAAGGACTGTCAGATTTTAATTTTCGTAGTGTCACTGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATTCCAGAAAGGTTTTCACTTGTAATTCGATCCTTACTGACCCAAGAAGGCATCTGTTTTACTCTGAAACCTGACTTCAAATTTCTTGAGGTTGCCTACCCTTATGTGGCTAAGCGACTATTGACTGACCCAAATCCAGCTCTACGTGAACGCCTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCGAAAATGAGTAACAATCCAGCATTGAAAGTGAAAGACACGCAAATCCAGAGGGACTGGAAATTTGAAAGAAAATTGGACCTCACTGACACAATCAAAGATGGAGCTCGCCTCTTCTTTGTTGATGAAGGAATACGTAGACAGCTTCTTCTTGCCTTGACTGAGGATTCAAAGCTTCATATTGAAGAGCTTGTCGATGTGTATAGGTTGGTTGAAGATCAGATAGACATCCCTTCTGTGGCCGTAGAAGTAGCTAGA 1989 0.448 MDSIYASSSCTVPHLLRRDTLLLLPRTSNFTAPYSLQRTKRARRVRISSSAATNGAVSRALQAVSSTALEQLDIERGVCIPFRKYSPEIVPAACCYLGFKTLFENTNPIKGVRNKVLESRGSTLSLMLRGVEIVWNLGLYWSNLVYDFLVGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPSFPNQIAFRIIEEDLGQPLEAVFSKISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISMQKLGCNAELIVDEFGEKLLEELDYTLEARNLEDFLENFKNDPTVKIPRVYKQFSGPRVLVMEWIDGIRCTNPQAIKEAGIDVDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLSPGTDVTPIIPALEAIWQNSAGKGLSDFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSNNPALKVKDTQIQRDWKFERKLDLTDTIKDGARLFFVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVAR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02499 663 CDD ABC1_ADCK3-like 200 446 - -
Vimu1g02499 663 ProSiteProfiles Protein kinase domain profile. 230 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu1g02499 663 Gene3D Transferase(Phosphotransferase) domain 1 228 429 - -
Vimu1g02499 663 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 122 631 - -
Vimu1g02499 663 SUPERFAMILY Protein kinase-like (PK-like) 201 439 IPR011009 -
Vimu1g02499 663 Pfam ABC1 atypical kinase-like domain 200 444 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02499 Vimu-Chr1 36288001 36298395 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02499 - - gmx:100819754 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02499 1 36288001 36298395 Vimu1g02499 1 36288001 36298395 ECH