Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02497 ATGGAGGATATTCAGTTGAACATCAACTGGGACGATGTAGTCTGTCCTATATGTTTGGATTTTCCTCATAATAGTGTTCTTCTCCAGTGTTCATCCTATGATAACGGATGTCGTGCTTTTGTTTGTGACACAAATCAATTGCACTCTAATTGTTTGGATCGCTTCAAAAATTCAAGTGCTTCTGCTGAAAATACTGAAAATAGCAATGCTAAGGAATCCAATGATGAATGCAATCTGACTTGCCCTTTGTGTAGAGGTGAGGTTTCTGGGTGGATTGTTGTTGATAAAGCTCGTGGTCATCTTGATGAGAAGAAGCGCTGTTGTGATGAGGTGCAATGTACATTCATGGGAAGTTACTTGGAGCTGCAAAAACATGCTCAGCTTGAACATCCTCATGCACGCCCATCAAAAGTTGATCCTGCACGCCAACTTGATTGGGAGAATTTTCAACAATCATCAGAGATCATAGATGTTCTGAGTACTATTCATTCAGAAATTCCCAGAGGGGTGGTTCTTGGAGATTATGTGATTGAGTACGGGGATGACGATGCTAGAGACGAGTTTGAGGACTTCCCTGGAGATGAGGAGTATGCAGATTATAGGATAGAAGAGACTGATGATGATTTTGTTAGTACAAGTGGCTCTTCAAGGAGTAGTGCTGGTTATCGCAGGTGTATAGACTTTTCTTTCTTTGTTCACTTTTACAATTCATGTCTTTATGGTGGACTTGCATGCATAACCTTTTCAATGTTTCTTTTGGTACCATGA 768 0.4049 MEDIQLNINWDDVVCPICLDFPHNSVLLQCSSYDNGCRAFVCDTNQLHSNCLDRFKNSSASAENTENSNAKESNDECNLTCPLCRGEVSGWIVVDKARGHLDEKKRCCDEVQCTFMGSYLELQKHAQLEHPHARPSKVDPARQLDWENFQQSSEIIDVLSTIHSEIPRGVVLGDYVIEYGDDDARDEFEDFPGDEEYADYRIEETDDDFVSTSGSSRSSAGYRRCIDFSFFVHFYNSCLYGGLACITFSMFLLVP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02497 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 96 IPR013083 -
Vimu1g02497 255 PANTHER OS01G0612600 PROTEIN 3 205 - -
Vimu1g02497 255 Pfam Protein of unknown function (DUF1644) 11 160 IPR012866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02497 Vimu-Chr1 36258278 36259225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02497 - - aprc:113846917 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02497 1 36258278 36259225 Vimu1g02497 1 36258278 36259225 ECH
Vimu1g02497 1 36258278 36259225 Vimu10g02845 10 39726092 39730490 PCT