Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02455 ATGGCACTGACCCTTCTTATGGTTGTTGCTGTTCTTGGGAATGTTGCCTCAATGTCTCTCTACGCTGCACCAACGGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGTACAGAAGAGTTTTCATGCATTCCTTACATCATAGCCCTGATGAACAGTCTCCTTTACACTTGGTATGGATTGCCAGTCGTAAGCAACAAGTGGGAAAATTTTCCTCTTGTCACAGTTAATGGAGTTGGGGTTCTCTTTGAACTATCTTACGTTCTCATCTATTTCTGGTATTCTTCACCCAAAGGAAAGGCAAGTTTATTCCTGATCTACCACCTCTTTCAAGACCAAGTGAAGGTGGCCGTTACAGCATCAGCAGTTCTTACAGTGGTAGGTGTAATTGCCATTGTATCAACTTTTGCCATCCCCGATCATCGTCACCGAAAGCTTCTGGTGGGTAGCATAAGCCTGGGGGTCTCAATAGCACTGTATGCATCGCCTCTGGTTGCAATGAAGAAAGTGATAGAAACCAAGAGCGTGGAATTCATGCCTCTGCCTTTGTCTTTGAGCTCCTTGTTGGTCAGTTTACTGTGGATGACTTACGGACTCCTCATTCGTGATATTTTCGTTGCGCTGGTTCTGCACTGCAAATACGGGAAGAGGAGACAGAAGGAAGAACCGAACAAGCAAAACGTGCAGGAGGAAAAGGTGGACATGGAAATGGGACATCATAAGGACGGGAATGTTCCTAGTAACTGA 744 0.4503 MALTLLMVVAVLGNVASMSLYAAPTVTFKRVIRKKSTEEFSCIPYIIALMNSLLYTWYGLPVVSNKWENFPLVTVNGVGVLFELSYVLIYFWYSSPKGKASLFLIYHLFQDQVKVAVTASAVLTVVGVIAIVSTFAIPDHRHRKLLVGSISLGVSIALYASPLVAMKKVIETKSVEFMPLPLSLSSLLVSLLWMTYGLLIRDIFVALVLHCKYGKRRQKEEPNKQNVQEEKVDMEMGHHKDGNVPSN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02455 247 PANTHER RAG1-ACTIVATING PROTEIN 1 16 206 IPR047664 -
Vimu1g02455 247 MobiDBLite consensus disorder prediction 218 247 - -
Vimu1g02455 247 Gene3D - 10 100 - -
Vimu1g02455 247 Gene3D - 146 211 - -
Vimu1g02455 247 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Vimu1g02455 247 MobiDBLite consensus disorder prediction 218 240 - -
Vimu1g02455 247 Pfam Sugar efflux transporter for intercellular exchange 146 208 IPR004316 GO:0016020
Vimu1g02455 247 Pfam Sugar efflux transporter for intercellular exchange 8 97 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02455 Vimu-Chr1 35546712 35548841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02455 1 231 Miscellaneous Gene Families AT5G53190 47.390 1.30e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02455 K15382 - gmx:100785477 327.405