Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02424 GCCGCCACCTACACTTTTACGCTTAATGTCTGGAATTCACTCCTTTTACTCATAAAGGGCCACTTTCCACCGCCTTCAAACTTATGTTTCTATATATTAATGGCCAAATCAAAACTTAGGTTTTCACTCACAAATATATCTACCACACCCTCGTCAACCACCATGCTCATACAAACTACTCTCTCCTTTGCATGCACTCCAAGAACTGTTCGCCACCGCAGCCTGCCACCGAAATGTGTTCTCTCAGTGTCCCCGCCATCAAAAGTGCGGAGGACACACTCATTGCCGCCGGAAAAGTTAGAGGTTTTCAGGTCACTGGAAGGATGGGCTTCGCAGTGTGTCCTACCGCTGCTGAAACCCGTGGAAAAAAGCTGGCAGCCCAACAGTTTCGTTCCCGACCCATCGTCGCCGTTTGAAGAGTTCATGGACGAGGTGAAGGCTCTTCGCGATCGAACCAAGGAGCTATCTGACGAGTACTTCTTGGTGCTGGTCGGTGACATGATCACAGAGGAAGCTCTTCCCACTTACCAGACCATAATGAACAGCCTCGACGGCGTGAAAGACGACTGCGGAACAAGCCCAAGCCCGTGGGCTGTGTGGAATCGAGGCTGGTCTGCAGAAGAGAACAGA 630 0.5063 AATYTFTLNVWNSLLLLIKGHFPPPSNLCFYILMAKSKLRFSLTNISTTPSSTTMLIQTTLSFACTPRTVRHRSLPPKCVLSVSPPSKVRRTHSLPPEKLEVFRSLEGWASQCVLPLLKPVEKSWQPNSFVPDPSSPFEEFMDEVKALRDRTKELSDEYFLVLVGDMITEEALPTYQTIMNSLDGVKDDCGTSPSPWAVWNRGWSAEENR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02424 210 Pfam Fatty acid desaturase 98 210 IPR005067 GO:0006631|GO:0045300
Vimu1g02424 210 SUPERFAMILY Ferritin-like 88 210 IPR009078 -
Vimu1g02424 210 Coils Coil 138 158 - -
Vimu1g02424 210 Gene3D Ribonucleotide Reductase, subunit A 84 210 IPR012348 GO:0016491
Vimu1g02424 210 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 84 210 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02424 Vimu-Chr1 35135650 35136280 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02424 32 210 Acyl Lipid Metabolism Gene Families AT3G02630 50.538 3.98e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02424 K03921 - gmx:100816146 223.402