Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02378 ATGTCGCTGGTTTGGTTTAGTAATGTACCCCATACACGTTTGGTTGAGGATAAAGGTGGGCAAAATTGGATATCAATAAAGAAAGATAAATTTGTTTTTCCTGGTGGTGGAACTCAATTTATACATGGTGCAGATAAATACCTGGATCAGATTTCTGAGGTTAGTCTTTTATTTAAATTTGTTCTGATATTTGTTGCTGACATATTGAGAGCTCTTTTGAAATTGAATATGCAGATGGTTCCTGACATTTCATTTGGTAAAAACATCAGAGTTGCATTAGACGTTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTTGATGCAACGTAATGTGACCACTCTTTCAATAGCTCCAAAAGATGTTCATGAAAATCAGATTCAATTTGCACTTGAGCGAGGTGTGCCTGCCATGGCAGCAGTATTTGCTACACACCGTTTATTATTCCCAAGCCAGGCATTTGATCTCATCCATTGCTCAAGATGCAGAATTAATTGGACTCGTGATGGTACTTCCTCTTTATTTAAGCCTTTGATCTCTCATTGTTCACCTCCTAACTATTCTATGGTTTTTTAA 573 0.377 MSLVWFSNVPHTRLVEDKGGQNWISIKKDKFVFPGGGTQFIHGADKYLDQISEVSLLFKFVLIFVADILRALLKLNMQMVPDISFGKNIRVALDVGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPAMAAVFATHRLLFPSQAFDLIHCSRCRINWTRDGTSSLFKPLISHCSPPNYSMVF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02378 190 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 55 IPR004159 GO:0008168
Vimu1g02378 190 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 3 173 IPR004159 GO:0008168
Vimu1g02378 190 Gene3D Vaccinia Virus protein VP39 66 173 IPR029063 -
Vimu1g02378 190 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 170 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02378 Vimu-Chr1 34420747 34422421 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02378 - - gmx:100809916 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02378 1 34420747 34422421 Vimu1g02378 1 34420747 34422421 ECH