Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02261 ATGGGAAGTGAAATAGCATCGCACGCGCCGCAGCAGAAATGCACTGATTCAGTAGCTGTTGCAGTGAACGGAAAAGCCACACAAATGCGCGAAGCGCTCGCGTGTGATGTCGCCGGCGCGGCGTTGTCCCCGGCACCACCGGTGGTTGTCACGGGACGGAGCCGTTCGCAGGGATTTCCGCGGCGAGTGACGCCCGCCACGCTGCCTCTGGCGCCGTTGTCTGGATCGGCGGTTGAGCGTGTTCTTCCTAACGGCGACTTCTACGCCGGGAGCTTCTCCGGAAACGTTCCTCACGGATCGGGGAAGTACCTGTGGACGGACGGGTGCATGTACGAGGGTGAGTGGAAGCGGGGAAAGGCCTCCGGCAAGGGGAAATTCTCGTGGCCCTCGGGTGCGACCTATGAGGGCCAGTTCAAATCGGGTCGAATGGAAGGGTTTGGAACCTTCGTCGGATCCGACGGCGACACCTACCGTGGGTCGTGGATCTCCGACCGGAAACACGGGTTTGGGCAGAAGCGCTACGCGAACGGGGACTTGTACGAAGGGTGTTGGAAGCGCAACGTGCAGGACGGTCACGGACGTTACGTCTGGAAGAACGGGAACGAGTACGTCGGAGAATGGAAGAACGGTGTGATTAACGGCAAGGGCGCTCTGGTGTGGGCCAACGGGAACCGTTACGAGGGGCAGTGGGAGAACGGGGTCCCCAAGGGTCACGGTGTTATGAAGATTCAGCATCGTTTGCTCTGGGGCGAGAATTTCAGCGTGAAGCGTTTCTCCGTTGACGGAAGAGGGAGCGTAAATAATGACAAGAGTTTCCCCAGGATTTGCATCTGGGAGTCGGAGGGTGAAGCGGGAGATATCACGTGCGATATTATCGATAATGTGGAAGCGTCCATGTTTTACCGCGACGGAACGACGTCGGATTGTGAAGATTTGAGAAGGAACCCTTGTTGTTTCGCCAGCGAAGTGAAGAGACCCGGGGAAACAGTTTCGAAAGGTCATAAGAATTATGACTTGATGCTTAATCTGCAATTGGGGATAAGGTACTCTGTTGGGAAGGAGGGTTCCACTTTGCGGGAGCTTAAGCAGAGTGATTTTGATCCGAAGGAGAAGTTCTGGACTAGGTTTCCCTCCGAGGGATCCAAGATTACGCCGCCGCATCAGTCCGCCGAGTTTCGATGGAAGGATTACTGTCCGGTGGTTTTTAGGCATTTGAGAAAGCTGTTTCAGGTCGATCCTGCTGATTACATGTTGGCTATATGTGGGGATGATGCTCTTCGGGAGCTTTCTTCTCCTGGGAAAAGTGGAAGCATCTTCTACTTGACCCAGGATGATAGATTCATGATAAAGACGGTGAAGAAATCTGAAGTCAAGGTGCTTCTTCGGATGCTTCGAAGTTATTATCAACATGTTTCTCGATATGAGAATTCACTTGTGACAAAATTCTATGGGGTGCACTGTGTTAAGCCGATTGGAGGCCAGAAGCTGTCTGGAGGGGTTGCCTCATCTTCAGTACTTGACTTTTTATTGTTTGTTGAAAATCAGATCCGGTTCATTGTGATGGGCAATCTATTTTGTTCCGAATATCCAATTCATAGACGATTTGACTTGAAAGGATCTTCACATGGGCGCACCACAGATAAACCTAAGGAGGACATTGATGAGACGACCACCCTCAAAGACCTTGATCTCAACTTTGCGTTTCGTGTACAAAGAAATTGGTTTCAGGAACTCATCAAACAAATTGAGCTGGACTGTGAGTTCTTGGAAGCCGAGAAAATTATGGATTACAGTCTTCTAGTTGGCATTCATTTTCGTGATGATAATACGTGTGACAAAATGGGGCTTTCACCTTTTCTCCTGCGCACTGGCAATAGGGATACTTATCAGAATGAAAAGTTCATGCGTGGTTATCGCTTTCTTGAAGCAGAGCTACAAGATAGAGATAGAGTTAAATCTGGAAGGAAATCATTGATTAGGCTAGGAGCCAATATGCCTGCAAGAGCTGAGCGAGTGGCACGGAGGAGTGACTTCGATCAATACACCACTGTTGGAATCAGCCATTTGACCCCTTATAGTAGCGGGGAGACTTACGATGTGATTCTATATTTTGGGATTATTGACATTTTGCAAGATTATGATATCAGCAAGAAGCTTGAGCATGCTTACAAGTCATTGCAAGTTGACCCTTCTTCAATTTCTGCTGTTGATCCAAAGCTCTACTCCAAGAGGTTTCGTGATTTTGTAGGTGAAGAAGATTTCTGGTTGTTATTGATCATAGCAATCAGGAAAAAATGCTTCAAATTTGAAACCCATTGCAATGATCTTGGAGTTGACTGGTTAAAATGCCACTCTACGGTCAAGTGGTTGACAGAAGTGAGATGTAGTGTCGTTGGGTTCTCTTCCACACACGAAAATCTCTTATCTGATGAAAGGAACATAAATAAGTGGGGCTTCATTGCGGGGTTGAAGAAAATTGAAAACTGGGGTCGTTGGGTTAGCTTTTGCAGTGAAAGCGAGGGCGTTTGGGTTCAAAGTGTGTTGAGGGCATCAAAAGCAGAGAAAGGAAGAGAGAGAGATGCGCTGTCTGAGAGGTCATTAAGTTTAGTGGTGGAGGGAATGGGAGCTGGATCCCACGTTCCCAATTTAAAAACAGCAGTGATGCAAACAAACAGGGATTAG 2682 0.4866 MGSEIASHAPQQKCTDSVAVAVNGKATQMREALACDVAGAALSPAPPVVVTGRSRSQGFPRRVTPATLPLAPLSGSAVERVLPNGDFYAGSFSGNVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGQFKSGRMEGFGTFVGSDGDTYRGSWISDRKHGFGQKRYANGDLYEGCWKRNVQDGHGRYVWKNGNEYVGEWKNGVINGKGALVWANGNRYEGQWENGVPKGHGVMKIQHRLLWGENFSVKRFSVDGRGSVNNDKSFPRICIWESEGEAGDITCDIIDNVEASMFYRDGTTSDCEDLRRNPCCFASEVKRPGETVSKGHKNYDLMLNLQLGIRYSVGKEGSTLRELKQSDFDPKEKFWTRFPSEGSKITPPHQSAEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSIFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHVSRYENSLVTKFYGVHCVKPIGGQKLSGGVASSSVLDFLLFVENQIRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKPKEDIDETTTLKDLDLNFAFRVQRNWFQELIKQIELDCEFLEAEKIMDYSLLVGIHFRDDNTCDKMGLSPFLLRTGNRDTYQNEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERVARRSDFDQYTTVGISHLTPYSSGETYDVILYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFVGEEDFWLLLIIAIRKKCFKFETHCNDLGVDWLKCHSTVKWLTEVRCSVVGFSSTHENLLSDERNINKWGFIAGLKKIENWGRWVSFCSESEGVWVQSVLRASKAEKGRERDALSERSLSLVVEGMGAGSHVPNLKTAVMQTNRD 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02261 893 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 174 252 - -
Vimu1g02261 893 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 96 749 IPR023610 -
Vimu1g02261 893 SUPERFAMILY SAICAR synthase-like 332 750 - -
Vimu1g02261 893 Gene3D - 524 751 - -
Vimu1g02261 893 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 329 753 IPR002498 GO:0016307|GO:0046488
Vimu1g02261 893 SMART morn 155 176 IPR003409 -
Vimu1g02261 893 SMART morn 224 245 IPR003409 -
Vimu1g02261 893 SMART morn 178 199 IPR003409 -
Vimu1g02261 893 SMART morn 201 222 IPR003409 -
Vimu1g02261 893 SMART morn 109 130 IPR003409 -
Vimu1g02261 893 SMART morn 132 153 IPR003409 -
Vimu1g02261 893 SMART morn 86 107 IPR003409 -
Vimu1g02261 893 FunFam Phosphatidylinositol 4-phosphate 5-kinase 118 162 - -
Vimu1g02261 893 SMART PIPK_2 362 754 IPR002498 GO:0016307|GO:0046488
Vimu1g02261 893 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 322 523 IPR027484 -
Vimu1g02261 893 Pfam MORN repeat 134 156 IPR003409 -
Vimu1g02261 893 Pfam MORN repeat 88 110 IPR003409 -
Vimu1g02261 893 Pfam MORN repeat 203 225 IPR003409 -
Vimu1g02261 893 Pfam MORN repeat 180 201 IPR003409 -
Vimu1g02261 893 Pfam MORN repeat 226 241 IPR003409 -
Vimu1g02261 893 Pfam MORN repeat 157 178 IPR003409 -
Vimu1g02261 893 Pfam MORN repeat 111 132 IPR003409 -
Vimu1g02261 893 Gene3D - 141 185 - -
Vimu1g02261 893 Gene3D - 90 140 - -
Vimu1g02261 893 Gene3D - 186 247 - -
Vimu1g02261 893 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 421 750 IPR002498 GO:0016307|GO:0046488
Vimu1g02261 893 CDD PIPKc_AtPIP5K_like 336 749 - -
Vimu1g02261 893 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 83 187 - -
Vimu1g02261 893 FunFam Phosphatidylinositol 4-phosphate 5-kinase 322 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02261 Vimu-Chr1 32761612 32767142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02261 24 749 Acyl Lipid Metabolism Gene Families AT1G21980 69.907 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02261 K00889 - gmx:100790632 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02261 1 32761612 32767142 Vimu1g02261 1 32761612 32767142 ECH