Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02251 ATGAAATCCAAAGCCGGAGGAAATGTCCTCGCCAGTGAGGCCAGCGGCGGTGGAGGTGGAAGCAGCAGCTCTCCTAGCCCGCCGCCGTCGCCGAGGCGGCAATCCGGTGTTACGCGGTGCCGGAGGAGGCTGAGACCGGCGAAGGAATCGTCGGAGAGTCGGCGGCTGGTCGCTGTCATAATGGCGCGGCGGAGCCTCCGGTACTTTTTCCTGCTGCCGTTGGTGTACATCTCCGGGTTGTTGATGTGTGTGGGGCCCTTCTCCGTCCTCATTGGCCACACACCTCTTCCTGGTTCTCGGTACCGCAGTCACGAGATCTTCCACAACCTCTGGCACCATATCGAAACCGATAATTCCTCTGTCATCGAGTTGGCTTCTGTATGGAAGTACAAAAGGAAGTTGAGAGAGCAAAAGCCTTGTCCGAATTTGACAGCTTTACATCGCGAACATTTTATGTCGCCTGGACTGAATGGTTTTTTGATTGTGGAAGCCAACGGGGGTCTTAACCAACAACGCTCTGCGATTTGTAATGCTGTGGCTGTGGCTGGACTCCTGAATGCAATATTAGTTATACCTCAATTTGAGTTTCACAATGTGTGGAAAGATCCAAGTGAATTTGGGGATATATATGATGAAGATCTTTTTATATCCACACTTGATGGTTATGTGAAGGTGGTCAAAGAACTGCCCGAGGCATTAATGGAGCGGCATAATTACAATATGAGTAATATCACTAACATCAAAGTTCAAGCTTGGTCTCCTGTCAGTTATTACCTTGGAGTTGTTTCTCCTATCTTGCAAAAGGAAGGGGTAATTCGAATAGCTCCATTTGCCAATCGTTTGGCGATGAGTGTTCCGCCACACATTCAATTTCTAAGATGTCTTACTAATTATAAAGCATTGAGGTTTTCTTCTTCAATATCTGCACTAGCAAACAAATTAGTTTACCGAATGATTCAGAAGAGCTCAAGGACAGATGGAAAATACATTGCCGTGCATCTTCGTTTTGAAGAGGATATGGTGGCATTCTCTTGTTGTGTATATGATGGAGGAGAGGCAGAAAAGTTGGAAATGGATTCAGTTCGAGAAAAAGGGTGGAGGGGTAAATTTAAAAGAAAGGACCGGATAATTTTGCCTGACCTTAATCGGGTTGAAGGAAAATGCCCACTAACCCCACTAGAGGTTGGTATGATGCTGCGTGGCATGGGATTTGATAACAATACTGCAATATATTTAGCTTCTGGGAAAATATATCGTGCAGAGAGATATTTGGCTCCTTTGATGAAGATGTTTCCCTATCTGTATACAAAGGAATCTCTTGCAACATCAGATGAGCTTGCTCCTTTTATGGGCTATTCCTCCCAATTAGCTGCACTGGACTACACAGTATGCTTGTCTAGTGAGGTTTTTGTAACAACTCAGGGTGGTAACTTCCCTCATTTTTTGATGGGCCATAGAAGATTCCTCTATGATGGCCATGCTAAGACGATTATCCCAGATAAGCGCAAGCTTGTTGTTCTTTTGGATAACTTGAGTATTAGTTGGAGAGCTTTCAAGGATCAGATGGAAGACATGCTCAGTGAAAGTGACCGCAAAGGAATCATGGTACCTAGAGTTAGAAAAATAAACCGAAAAACTTCTGTCTACACGTACCCCTTACCAGAATGCAGGTGCCTACAGCAGTCTCTTGCCAATCAAATTGCCCACAATCTTGACGCTCTGTATAATTACAACAGAACAAAAGCTTAA 1749 0.4494 MKSKAGGNVLASEASGGGGGSSSSPSPPPSPRRQSGVTRCRRRLRPAKESSESRRLVAVIMARRSLRYFFLLPLVYISGLLMCVGPFSVLIGHTPLPGSRYRSHEIFHNLWHHIETDNSSVIELASVWKYKRKLREQKPCPNLTALHREHFMSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPQFEFHNVWKDPSEFGDIYDEDLFISTLDGYVKVVKELPEALMERHNYNMSNITNIKVQAWSPVSYYLGVVSPILQKEGVIRIAPFANRLAMSVPPHIQFLRCLTNYKALRFSSSISALANKLVYRMIQKSSRTDGKYIAVHLRFEEDMVAFSCCVYDGGEAEKLEMDSVREKGWRGKFKRKDRIILPDLNRVEGKCPLTPLEVGMMLRGMGFDNNTAIYLASGKIYRAERYLAPLMKMFPYLYTKESLATSDELAPFMGYSSQLAALDYTVCLSSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTIIPDKRKLVVLLDNLSISWRAFKDQMEDMLSESDRKGIMVPRVRKINRKTSVYTYPLPECRCLQQSLANQIAHNLDALYNYNRTKA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02251 582 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 60 562 IPR024709 -
Vimu1g02251 582 PIRSF UCP009360 32 562 IPR024709 -
Vimu1g02251 582 Pfam GDP-fucose protein O-fucosyltransferase 159 488 IPR019378 -
Vimu1g02251 582 CDD O-FucT_plant 159 496 IPR024709 -
Vimu1g02251 582 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02251 Vimu-Chr1 32500448 32509728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02251 119 558 Miscellaneous Gene Families AT1G22460 37.418 1.42e-89 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02251 - - vum:124828902 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02251 1 32500448 32509728 Vimu1g02251 1 32500448 32509728 ECH