Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02220 ATGGTAATGTGGGTATTTGGGTATGGTTCCTTGATCTCGAAAGCTGGGTTTCACTATGATGAACGTGTTATTGGTTTCATCAAAGGCTATCGACGTGTCTTCTACCAAGGCTCTACTGATCACAGAGGGACCCCTGAGTTCCCTGGAAGAACAGTGACCCTGGAGCCTGCTGAAGGAGAAATATGTTGGGGAGCTGCTTACAAGATCTCAAAGGAAGAAGATGCAGAAACTGCAATAACATATCTGGAAGTAAGGGAGAAGCAATACGACAAAAAGGAATACCTTGATTTTTATACTGACCTTACTGCTACATCTCCAGCAGTTTCCGGAGTGATGGTATATATAGCAACTGCAGATAAGAAAGCTAATGTAAATTATTTGGGCCCTGCATCTGATGAAGAGATTGCGAGGCAAATAATTCAGGCTGAAGGTCCTGCAGGACCCAACAGAGATTATCTTTTCAATCTTGAAAAGGCTCTTCTTCAAATAGGATGCAAAGACAAACATGTCATTGATCTCGCAAATGAAGTCAGGCGTATTCTCGAAGAGGAACAATGA 558 0.4247 MVMWVFGYGSLISKAGFHYDERVIGFIKGYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGEICWGAAYKISKEEDAETAITYLEVREKQYDKKEYLDFYTDLTATSPAVSGVMVYIATADKKANVNYLGPASDEEIARQIIQAEGPAGPNRDYLFNLEKALLQIGCKDKHVIDLANEVRRILEEEQ 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02220 185 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 184 IPR006840 GO:0006751|GO:0061928
Vimu1g02220 185 Gene3D - 2 183 - -
Vimu1g02220 185 FunFam Gamma-glutamylcyclotransferase 2 185 - -
Vimu1g02220 185 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 1 117 IPR036568 -
Vimu1g02220 185 CDD GGCT_like 5 116 IPR013024 -
Vimu1g02220 185 Pfam ChaC-like protein 3 179 IPR006840 GO:0006751|GO:0061928
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02220 Vimu-Chr1 31874523 31878184 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02220 K22596 - gmx:100305985 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02220 1 31874523 31878184 Vimu1g02220 1 31874523 31878184 ECH