Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02206 ATGGACGAATCGTCGTTGCAATTCGTCTCCGAAATAGGAAGACACCTTGCTCAACGAACTCGTCCCAACAAGGACTTCATCGTCAAATCCCTCAGAAAAGCTGCAAATACTCTGTCTCAGATAAAACAGTCTCCTCAACCGCGGACGGCCAAGGAATTACGAGCTGCAAAGAAACAAGAAGATGCTTTGAAGCCCCTGTCAAATGCTGTGGTTTGTGGTGGTCTGCTTCAACATGCAGATAAGGAAGTTAGACTTCTGGTTGCTATGTGTGTCACGGAGCTCTTTAGACTTATGGCACCTGAACCGCCTTTTGAAGACAAGCATTTGAGGGATGTATTTACACTTATCATTAATTTGTTTGAGGATCTAGCTGATACTGCAAGTCCATTCTTTTCAAAAAGGGTTAAAGTATTGGAGATAATGGCTCAACTAAAGTGTTGTGTGATAATGCTGGAGATTAACTGCCTGGACCTAGTTCTTGAGATGTTCAATATTTTCTTCTCAGTTGTGAGGTTGAACATGAGATCAATCTCCTCCCTCTTTGTGCTTGACCGCTTTACTGTATTTCTGGGCTTATTATCTAATTGGGGAAAAATGTATTAG 603 0.4196 MDESSLQFVSEIGRHLAQRTRPNKDFIVKSLRKAANTLSQIKQSPQPRTAKELRAAKKQEDALKPLSNAVVCGGLLQHADKEVRLLVAMCVTELFRLMAPEPPFEDKHLRDVFTLIINLFEDLADTASPFFSKRVKVLEIMAQLKCCVIMLEINCLDLVLEMFNIFFSVVRLNMRSISSLFVLDRFTVFLGLLSNWGKMY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02206 200 Pfam Sister chromatid cohesion protein PDS5 protein 25 173 - -
Vimu1g02206 200 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 9 171 IPR039776 GO:0007064
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02206 Vimu-Chr1 31640460 31676673 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02206 K11267 - gmx:100777822 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02206 1 31640460 31676673 Vimu1g02206 1 31640460 31676673 ECH