Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02185 ATGATGGATAAGAAGAGATGGCTGTGGAAGAGGAAGTCTTCTGAGAAGAGCCCTGGTGAAAATGAAAGTTCAGGATCTGTTTCTTCTCATTCCGAGAGGTATTCAGATGAACAGGATGCACTGAAGGAATCTCCTAGTAGAAGCAATCATTCACCTGATGTCACATCAAAAGCTACTGTCTATGCAGAAGCAGTTGACTATAGTTCATTTATCAATGAACAATTGCCTGAAGAAGTCACCCCTAAAACTGTACCAGCTACAGGCATTTCAAGTGATTGTTCATCAGAGAAAGACGAAAATGGAGAAAATGAAAACATAAAAGATGTAAAGGAAGATGTTCTAAATGATGGGTTGAGGAACATGTCGGAGAAGCTATCTGCTGCACTAGTGAATGTCAATGCCAAAGAAGACTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCTATTGCAGGCTGGGAAAAGGCTGAAAAAGAAGTGGCAGTTTTGAAGAAGCAACTTGACACAGTCATTCTCAGGAACTCGGTTTTGGAAGATCGGGTCACTCATCTAGATGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACGAGAGAAGAGCATGAAGAGAGTATTTGTGATGCTGTTGCAAAAAAGACACAAGAATTGGAATCAGCCAAAATTAAACTTGAGAACAAACTCACAGAGCTTAAAAAAAAATTAGATGATTCAGAGACCAGGTCTTCAATTGACTTTGATATGTATAGAAAGGTAGAATGTTTGGAGAAAGAGAACATGACTCTCAAGCATGAGATTCTTGTTCAATCAGAAGAGCTGGAAATCAGGACAATTGAGAGGGATCTAAGCACTCAAGCTGCTGAGACAGCTAGCAAGCAGCATTTGGAAAGCATCAAGAAAGTAGCCAAGCTTGAAGCTGAATGCCGGAGATTGAGGAGTGTGGCTTCTAAAGCTTCCTTAGTTAATGATCATAAATCAATTGTTCAGTCCTCATTCAGTGTTGAATCTCTAACAGATAGTCAATCAGACAGTGCAGAGCGGCATACTGCAGTGGAAATTGAAGCTCACAAGATGAATGGCTCAGAACCAAACAAGTTTGAGTCAAGTTGTTCTGACTCGTGGGCGTCTGCACTAATTGCTGAGCTTGATCAGTTCAAGAATGAAAAGTGCAAACAAACTCCTTCCTGTTCTGTTAAACTTGATCTCATGGACGATTTTCTTGAAATGGAACGACTTGTTGCATTGCCTGAAACTAAGAAGGAAAGCTTGGTCCAAGAGTCAGTTGTTACCAATCAATCCATAAACAAAGAATGCTCTCTCAGCGTAGACTTTGAGATCATGAATCAGCACATGGATGAGTTAAAAGAGAAATTAGAGAAGGTGGAAACTGATAAAGCTGAACTAGAGATAGCTTTGATGAAAAGTGAAGAATGTATTGAGGAGTCACAACTTCAGTTGAAGGAAGCAGGAGAGAAATTGGAGGAGTTGCAGAGAGAGCTAGAAAATGCCTACAACTCAAAGCAAAGGGTAGAAGATCACCTACTGGACATAGTGGCCGAGGCTCAAACATTATCTGTGAAGGTTGAATTCTTAGAATCTGAGGTTGATAAGGAGAGGGCCGTCTCCAGTGAGATTGCAATGAAGTTTAGGGACTTGGAGGAAGAGTTAGAAAGAAAATCTGCAGAGGTTGACACATTAGAAGCAGAGCTTGATAAGAAGAAGGTTGTGTCAAATAAAATTGCCATGAAGTGTAAGGACCTGGAGAAAGAGCTAGAAAGTAAATCCAACAAGGTTGACTTGTTAGAAGCAGAGGTTGCTAAGGAAAGGGAGGAGTCAGATAAAATTGCAAAAAAGTTGAAGGACATGGAGGAAGTGCTAGACAGCAAATCTGCAAAGGTTGAAGTATTAGAAGCAGAAGTTGCTAAGGAGAGGGATGTGTCTGATAAAATTGCGAAAAAGTGTAAGGACCTGGAGGAAGTGCTAGAGAGAAAATCTGAAAAGGTTGAGTTATTAGAAGCAGAAGTTGATAAAGAGAGGACTGTGTCAGATAAAATTTCATTGAGGTGTAAGGACCTGGAGGAGAAGCTGGAAAGCAAATCTGCAAAGGTTGATTTGTTAGAAGAAGAGGTTCATAAGGAGAGGACTACTTCAAAAGAAATTGCAATGAAGTGTAGGAAATTGGAGGAAGAATTACTCAGGTCAACCGCTGGCTCATATGGAGAAAAGAAGATTAAGCAGGAGGACCTAGCACTGGCAGCTGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCATCATTGGGAAATCAGTTGAAATCCCTGGCTACACTAGAAGATTTCCTTATTGACACCGCAAGCATTCCTGCAAGTCCATCACTCATTGCTCAGGCTGGTGGGGAGATGTGGAAGTTGCATTCCAATGGCACATTTTCACCCAAAAGAGATTCCATTTCTTCAAGGTTGGCTCATGGTAGCTCTAGTCCACCCTTGAACAAAAATGAGGAGACCTCACCACTTTCATCATCTTCATCAACATCGTCACCAGCTATGCCAAATCATGTCAGTTCTGAGAGGAGTAGAAATGGCTTTGCAAAATTTTTCTCTAGAACCAAGAGTGGAATCCGGCTAGAAATTTAG 2634 0.4123 MMDKKRWLWKRKSSEKSPGENESSGSVSSHSERYSDEQDALKESPSRSNHSPDVTSKATVYAEAVDYSSFINEQLPEEVTPKTVPATGISSDCSSEKDENGENENIKDVKEDVLNDGLRNMSEKLSAALVNVNAKEDLVKQHAKVAEEAIAGWEKAEKEVAVLKKQLDTVILRNSVLEDRVTHLDGALKECVRQLRQTREEHEESICDAVAKKTQELESAKIKLENKLTELKKKLDDSETRSSIDFDMYRKVECLEKENMTLKHEILVQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLRSVASKASLVNDHKSIVQSSFSVESLTDSQSDSAERHTAVEIEAHKMNGSEPNKFESSCSDSWASALIAELDQFKNEKCKQTPSCSVKLDLMDDFLEMERLVALPETKKESLVQESVVTNQSINKECSLSVDFEIMNQHMDELKEKLEKVETDKAELEIALMKSEECIEESQLQLKEAGEKLEELQRELENAYNSKQRVEDHLLDIVAEAQTLSVKVEFLESEVDKERAVSSEIAMKFRDLEEELERKSAEVDTLEAELDKKKVVSNKIAMKCKDLEKELESKSNKVDLLEAEVAKEREESDKIAKKLKDMEEVLDSKSAKVEVLEAEVAKERDVSDKIAKKCKDLEEVLERKSEKVELLEAEVDKERTVSDKISLRCKDLEEKLESKSAKVDLLEEEVHKERTTSKEIAMKCRKLEEELLRSTAGSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLIAQAGGEMWKLHSNGTFSPKRDSISSRLAHGSSSPPLNKNEETSPLSSSSSTSSPAMPNHVSSERSRNGFAKFFSRTKSGIRLEI 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02185 877 Coils Coil 252 272 - -
Vimu1g02185 877 Coils Coil 542 716 - -
Vimu1g02185 877 Coils Coil 207 241 - -
Vimu1g02185 877 MobiDBLite consensus disorder prediction 812 861 - -
Vimu1g02185 877 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 2 561 - -
Vimu1g02185 877 Pfam Filament-like plant protein, long coiled-coil 248 317 IPR008587 -
Vimu1g02185 877 Pfam Filament-like plant protein, long coiled-coil 367 433 IPR008587 -
Vimu1g02185 877 Pfam Filament-like plant protein, long coiled-coil 135 239 IPR008587 -
Vimu1g02185 877 Pfam Filament-like plant protein, long coiled-coil 669 775 IPR008587 -
Vimu1g02185 877 MobiDBLite consensus disorder prediction 1 18 - -
Vimu1g02185 877 MobiDBLite consensus disorder prediction 72 103 - -
Vimu1g02185 877 Coils Coil 444 513 - -
Vimu1g02185 877 MobiDBLite consensus disorder prediction 1 57 - -
Vimu1g02185 877 MobiDBLite consensus disorder prediction 32 46 - -
Vimu1g02185 877 SUPERFAMILY Tropomyosin 583 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02185 Vimu-Chr1 31290699 31295575 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02185 - - aprc:113847186 1274.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02185 1 31290699 31295575 Vimu1g02185 1 31290699 31295575 ECH