Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02067 ATGAGGATCGAGCAAGAGAGTGACGGAGTCTCAGCTTCCACAAAGCACCTAGTATTTGCGTATTATGTCACTGGTCATGGTTTTGGCCATGCCACTCGAGTCACTGAGGTGGTGCGGCATTTGATTCTCGCGGGGCATGATGTGCACGTCGTCACTGGTGCTCCTGATTTTGTTTTCACCACTGAAATACAGTCTCCTCGCTTGTTCATTCGCAAAGTGCTTTTGGACTGTGGAGCTGTTCAGGCAGATGCGTTGACCGTTGATCGCCTTGCCTCTTTGGCTAAGTATTCTGAAACCGCAGTGAAGCCCCGTGCAAAAATCTTGGCTCAAGAATCTGAGTGGCTGAACTCTATCAAAGCTGACTTAGTGGTCTCGGATGTTGTCCCAGTTGCATGTCGTGCAGCAGCAGATGCAGGCATTCGCTCTGTTTGTGTGACCAATTTCAGTTGGGACTTCATCTATGCAGAGTATGTCATGGCTGCTGGACTAAATCATCGCTCAATAGTTTGGGAGATAGCAGAGGACTATTCACATTGTGAGTTCCTTATCCGCCTCCCAGGATATTGCCCAATGCCTGCTTTTCGGGATATTTTTGATGTCCCTCTCGTTGTGAGGAGGTTGCACAAATCTGCAAAAGAGGTGAGGAAGGAACTTGGGGTAACTGATGATGTGAAGCTAGTTATTCTTAACTTCGGTGGGCAGCCATCAGGATTGAAGCTAAAGGAGGAATTTTTACCGCCTGGCTGGTTGTGCCTGGTTTGTGGTGCTTCTAAAAGTGATGACCTTCCACCTAACTTCATAAAACTTGCTCAAGATGCGTATACACCTGACATTATTGCAGCATCTGACTGTATGCTCGGGAAAATTGGATATGGCACAGTTAGTGAGGCCTTGGCATACAAGTGTCCTTTTGTCTTTGTACGAAGAGATTATTTCAATGAAGAACCTTTTTTGAGAAATATGCTTGAGGTACATTATCAATGTGGTGTTGAAATGATTAGAAGGGATTTACTGACTGGTCACTGGAGACCTTATCTTGAACGAGCGTTAAGTTTGAAACCCAGCTATGAAGGAGGCATTAATGGTGGTGAGGTTGCAGCACGCATCCTGCAGGAGACAGCTTTGGGAAAAAATTATGCATCAGATAAGCTTAGTGGTGCTAGAAGGTTGCGTGATGCCATAGTTCTTGGGTATCAACTTCAAAGGGCCTCTGGCCGAGACATTACAATCCCAGAATGGTATACAACTGCAGAAGACCAACTTGGGCCCACGACACCTGGTTCCCCTGTGGATGATGGAAGCTTAGCATTGAGCCCGGACTTTGCAAACTTTGACATTCTTCATGGAGATGTTCAAGGACTTCCGGATACTATGGCATTCTTACATAGCCTGTCTGAATTAGAGGAGAAGCACAAAAGGCGGGAGCGTAAGGCTGCAGCCAGTCTCTTCAACTGGCAGGAGGACATTTTTGTTACGAGAGCTCCTGGAAGATTAGATGTTATGGGTGGTATTGCTGACTATTCTGGAAGTCTTGTTCTGCAGATGCCAATTAAGGAAGCCTGCCATGTTGCTTTGCAAAGAATCCATCCAAGTAATCATAGGCTGTGGAAACATGCTGAAGCTCGGCAGAATGACAAAGGGGGAAATCCAACTGCTGTCTTGCAAATCGTATCATTTGGATCAGAATTGAGCAATCGAGGCCCAACATTTGACATGGATTTGTCTGATTTTATGGAAGAAGGCAAACCAATCACATATGAGAAAGCAAAGAAATACTTTGCTCAAGATCCTTCCCAAAAGTGGGTAGCACTTGTGTGGGCAGCATATGTAGCAGGTGCTATTTTGGTCTTAATGACTGAATTGGGTGTTCGATTTGAAGATAGTATAAGCATGCTGGTTTCATCTGCAGTTCCAGAAGGGAAAGGTGTATCATCTTCTGCCTCTGTGGAGGTTGCTAGTATGTCTGCTATTGCAGCTGCTCATGGGTTAAATATCAGCCCAAGGGAACTGGCCATACTCTGCCAGAAGGTGGAAAACCACATTGTAGGAGCTCCTTGCGGAGTCATGGACCAGATGGCTTCAGCATGTGGTGAAGCCAACAAACTTCTTGCTATGGTTTGCCAGCCTGCCGAAATTATTGGTCTTGTTGACATTCCCAGCCATATCCGTTTCTGGGGAATTGATTCTGGAATAAGACACAGCGTTGGAGGTGCAGATTATGGTTCTGTTAGAATTGGCACCTTTATGGGTATGAAGATGATAAAGGCCAAGGCTTCTGAGGAATTGTCCAAGAGTTGTGCTGCGAATGGGTTGAACTATGATGAAGTGGAACAAGATGATCTAGAACTACTCAAACAAGAAGCCTCCTTAGATTACTTATGTAATTTGCCACCTCATAGATTTGAGGCTCTTTATGCTAAGTCTCTTCCAGAATCCATTGCTGGTGAGACATTTTTAGAGCAACATGAAAATCATAATGATCCTGTCACTATTATTGATCAGAAGCGTACTTACGTAGTTAAAGCTCCCACAACGCATCCAATCTATGAAAACTTCCGAGTTAAGACCTTCAAGGCACTTCTATCATCTGCATCTTCAACCTATCAGCTTGCATCCTTAGGAGAACTGCTATATCAGTGCCACTACAGCTACAGTGCTTGTGGACTTGGCTCTGATGGAACAGATAGGCTTGTACACTTAGTGCAAGAGTTGCAGCACAGTGCAGAATCCAAATCTGAAGGTGGGATTTTATATGGAGCCAAGATAACAGGTGGTGGTTCAGGCGGAACAGTTTGTGTAATTGGTAGAAACTGTCTCAAGAGCAGTGAACACATTTTTGAGGTTCAGCAGAGATACAAGAAAGCTACTGGGTATATGCCTTTTCTCTTTGAGGGTTCATCACCAGGTGCTGGAAAATTTGGGTACCTGAAAATACGCCGTCGAGCTGCCCCAAAAAAGGCTAATACGGGTGATGATGATGCTGCAGTCACGGTGGAAAATAGCAGTTGA 3009 0.4503 MRIEQESDGVSASTKHLVFAYYVTGHGFGHATRVTEVVRHLILAGHDVHVVTGAPDFVFTTEIQSPRLFIRKVLLDCGAVQADALTVDRLASLAKYSETAVKPRAKILAQESEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLNHRSIVWEIAEDYSHCEFLIRLPGYCPMPAFRDIFDVPLVVRRLHKSAKEVRKELGVTDDVKLVILNFGGQPSGLKLKEEFLPPGWLCLVCGASKSDDLPPNFIKLAQDAYTPDIIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEVHYQCGVEMIRRDLLTGHWRPYLERALSLKPSYEGGINGGEVAARILQETALGKNYASDKLSGARRLRDAIVLGYQLQRASGRDITIPEWYTTAEDQLGPTTPGSPVDDGSLALSPDFANFDILHGDVQGLPDTMAFLHSLSELEEKHKRRERKAAASLFNWQEDIFVTRAPGRLDVMGGIADYSGSLVLQMPIKEACHVALQRIHPSNHRLWKHAEARQNDKGGNPTAVLQIVSFGSELSNRGPTFDMDLSDFMEEGKPITYEKAKKYFAQDPSQKWVALVWAAYVAGAILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNISPRELAILCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAEIIGLVDIPSHIRFWGIDSGIRHSVGGADYGSVRIGTFMGMKMIKAKASEELSKSCAANGLNYDEVEQDDLELLKQEASLDYLCNLPPHRFEALYAKSLPESIAGETFLEQHENHNDPVTIIDQKRTYVVKAPTTHPIYENFRVKTFKALLSSASSTYQLASLGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSAESKSEGGILYGAKITGGGSGGTVCVIGRNCLKSSEHIFEVQQRYKKATGYMPFLFEGSSPGAGKFGYLKIRRRAAPKKANTGDDDAAVTVENSS 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02067 1002 FunFam GHMP kinase-like 208 351 - -
Vimu1g02067 1002 FunFam L-arabinokinase 480 724 - -
Vimu1g02067 1002 SUPERFAMILY GHMP Kinase, C-terminal domain 722 972 IPR036554 -
Vimu1g02067 1002 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 332 - -
Vimu1g02067 1002 FunFam L-arabinokinase 16 168 - -
Vimu1g02067 1002 PIRSF Gal_kin_glcsltr 1 984 IPR012369 -
Vimu1g02067 1002 Gene3D Glycogen Phosphorylase B; 21 244 - -
Vimu1g02067 1002 PANTHER SLR1395 PROTEIN 1 710 - -
Vimu1g02067 1002 Pfam Glycosyl transferase family 1 21 147 - -
Vimu1g02067 1002 SUPERFAMILY Ribosomal protein S5 domain 2-like 487 711 IPR020568 -
Vimu1g02067 1002 FunFam L-arabinokinase 826 958 - -
Vimu1g02067 1002 Gene3D - 829 958 IPR036554 -
Vimu1g02067 1002 PRINTS Mevalonate kinase family signature 494 518 - -
Vimu1g02067 1002 PRINTS Mevalonate kinase family signature 678 697 - -
Vimu1g02067 1002 PRINTS Mevalonate kinase family signature 635 657 - -
Vimu1g02067 1002 PRINTS Mevalonate kinase family signature 919 936 - -
Vimu1g02067 1002 Pfam GHMP kinases C terminal 870 937 IPR013750 -
Vimu1g02067 1002 Pfam GHMP kinases N terminal domain 632 697 IPR006204 GO:0005524
Vimu1g02067 1002 Gene3D - 466 725 IPR014721 -
Vimu1g02067 1002 Pfam Galactokinase galactose-binding signature 483 526 IPR019539 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02067 K12446 - gmx:100787860 1776.14