Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02065 ATGGCCCAATGCAGGCCCAAGGTCCACTCTTTATTGTCAGACTATTTTGCACACACTGCTAATGCTTCTCTTCTCTGTAGCCACCTACTAAGAGACATTGATCGCCTGCGTCTCAAGTATTCAGCACTCAAAACCATTCTTCAATGCCTTCCATCTAACCAAATCCCTTCACCAATGGTAATAACCCGTTTAACCGAATTTTCAAACTTTTCCAACCCGTTTGCCGCGTTGGGTCTGGTTCGGGCCACCCAGTGTCAGTGCTCCGACTTGCAAAAGCGGCTCGAGTCGAGCCGCGATAAGGCGCGAGCCAAGCTCCAATTAGCTGCGAAAATAAAATGTGGCTCGGCCTGTCTAGTTGCGGCTATAACGGCTTCACTTGTGGTTCTTATGATGTCTCATGGCTTTGCATTGATTGTGGCTATGCCTGGGTTGGCTTCAATGAATCTGGGTTCAGAAAGGAAGTTCGGTTTGGTGATGGCTCGGCTGAACGCAGCTACGAAAGGAACTTATATAATGAATAAGGACTTGGAGACGACGGGTCGGCTTGTGGGTCGGCTAAATGATGAGCTGGAGCACATGAGGAGGACAGTGAGATTTTGGCTTGAGAGGAAGGATGATAAAGTTCAGGCCGATGGTGGAGTTGTACGGTTGTTGAAGAAGAACCAATGTAGCTTTAGTGAGCAATTGGATGAGTTGGAAGAACATTTGTATTTGTGTTTCATGACTATTAACAGGGCTAGAGAACTTGTGCTTAGTCAAATTAGTAATTTAACTTATTGA 780 0.4615 MAQCRPKVHSLLSDYFAHTANASLLCSHLLRDIDRLRLKYSALKTILQCLPSNQIPSPMVITRLTEFSNFSNPFAALGLVRATQCQCSDLQKRLESSRDKARAKLQLAAKIKCGSACLVAAITASLVVLMMSHGFALIVAMPGLASMNLGSERKFGLVMARLNAATKGTYIMNKDLETTGRLVGRLNDELEHMRRTVRFWLERKDDKVQADGGVVRLLKKNQCSFSEQLDELEEHLYLCFMTINRARELVLSQISNLTY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02065 259 Coils Coil 80 100 - -
Vimu1g02065 259 PANTHER UPF0496 PROTEIN 3-RELATED 3 255 IPR007749 -
Vimu1g02065 259 Pfam Protein of unknown function (DUF677) 160 254 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02065 Vimu-Chr1 29065474 29067540 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02065 - - pvu:PHAVU_001G077600g 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02065 1 29065474 29067540 Vimu1g02065 1 29065474 29067540 ECH