Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02059 ATGAAGCGCACAAGGAGAGAAATGGAGAAGAGATCAGAGATAGGTTCTGCCATTGAAGAACTTTCCATGATGGTCATAGTTAAACCTGGTGAAAAGCATGAGTCTGCTCATATCCCCACCAAGCCTTTTGTTTCTGTTTGCTATTTGGTGCTGCAAGTTCTTGATAAGATAGGACCGACAATGGCTGTTTTGAGACAAGATGTGTACCAGAATATTAAGACACTGGAACTGATGCATGAGTCAAATACCTCAGTGAATTCGAATTTGGTCGAGATATTGAAGTCAGAAGCGAAAGAAGGCAATGCAAGAAAAGGTTCTAGCTGCAGTAAGGCCTTGGTTTGGCTCACTAGGACCCTGGATTTCACCTCATCATTATTACAGACACTAGCAAAAGACCCTGAAAAGAGAATGGAGCAAGTAGTTGAGGAGGCTTATGAATTAACCTTAAAACCGTGGCATGGATGGATTTCATCAGCTGCTTTCAGAGTGGCTCTAAGACTGGTACCAGAGAGTAAAACATTTATTAATATTCTTAGAACTGATGAGGAAAACTATGACACCCTAAAGGAGAAAATACAGATCTTGGTTTCTCTGTTTGTGCCTTTTCTTGAGGATATCCATTGTATTCTAAGATTGTATAACTTGGACAAGATGAAGTCAACCTGA 666 0.4039 MKRTRREMEKRSEIGSAIEELSMMVIVKPGEKHESAHIPTKPFVSVCYLVLQVLDKIGPTMAVLRQDVYQNIKTLELMHESNTSVNSNLVEILKSEAKEGNARKGSSCSKALVWLTRTLDFTSSLLQTLAKDPEKRMEQVVEEAYELTLKPWHGWISSAAFRVALRLVPESKTFINILRTDEENYDTLKEKIQILVSLFVPFLEDIHCILRLYNLDKMKST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02059 221 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 9 209 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vimu1g02059 221 SUPERFAMILY Glycolipid transfer protein, GLTP 32 218 IPR036497 -
Vimu1g02059 221 Gene3D Glycolipid transfer protein 3 217 IPR036497 -
Vimu1g02059 221 FunFam Glycolipid transfer protein 2 3 216 - -
Vimu1g02059 221 Pfam Glycolipid transfer protein (GLTP) 38 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02059 Vimu-Chr1 28648651 28650275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02059 13 182 Acyl Lipid Metabolism Gene Families AT2G34690 21.637 1.01e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02059 - - gmx:100799957 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02059 1 28648651 28650275 Vimu1g02059 1 28648651 28650275 ECH