Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02055 ATGGGTTTGATGGGGATTTTTTGTTTTTCCATATTCCTTTTTATCCCAGTTGAATCTACTGGAAGAGAAGGGACTATGTGGCTCCGAAACTTGGGTGAGGAGTCCAGAGGAACTGTGAGTTTGACCGTCTTCAGTGCAAGTATATTTGTTGTTGCTGCTCTTGTTCTCTCCATGTATTTAGTATTTGAGCATTTAGCCTCCTATAATCAGCCCGAGGAACAAAAGTTTTTGATTGGTATCATTTTAATGGTTCCTGTTTATGCATTGGAATCAGGGCGAGAGCAGCCCACTCCAGGATCCCAACTCCCTTCAAGCTGGGAGGAAAGCAAATGTAATAATTCATTCTCAAGTACTGATGTTTGTATGGTGCAGTTTTTGTCAGTTTTGGATTCTGATGCAGCATTTAACAGTGAAATTATCCGGGAATGCTATGAAGCTTTTGCATTATACTGCTTTGAGAGATATTTGATAGCTTGCTTAGGTGGTGAGGACAAAACTATTCAATTTATGGAAAGTATGAACCTAACAGACTCTAGTATTCCTCTTCTGAAAGAAGCATATGCATATGGAGTTGTAGAGCATCCATTTCCCTTAAATCTCTTCTTGAAGGATTGGAATCTAGGCTCCGAGTTCTATCAATCTGTGAAAATTGGCATTGTACAATATATGATACTGAAGATGATATGTGCAGTACTGGCAACAATTCTCCAATCTTTTGGGGTTTATGGAGAGGGGAAGTTTGAATGGAAATATGGGTATCCCTACTTGGCACTAGTTCTTAACTTTAGTCAGACATGGGCCCTATATTGCCTTGTACAATTCTATTCTGTTATTAAAGATAAGTTGAAACCAATCAAACCATTGGCAAAGTTTCTAACTTTTAAGTCAATTGTCTTCCTCACATGGTGGCAAAGTGTGGCTGTTGCATTTCTATTTTATGTGGGAGCTTTTAGGGGATCATTGGCTCAGGAGTTGAAAACACGTATACAGGACTACATCATCTGTATAGAGATGGGCGTGGCTGCTGTTGTGCACCTTTATGTCTTCCCAGCAGAACCTTACAAAAGGGGGGAGAGGTGTGTCCGTAATGTAGCCGTAATGACCGACTATGCCTCGCTAGGAGTGCCACCAGATCCCGAGGAGGTTCGAGACTGTCAGCGCTCGACGAGAACATGGCTGGGAGCTTATGAGAGAGAAAAACCTATGAAATTTACCCAGAGTGTTCGGGACGTTGTTGTTGGAAGTGGTGAAATTATTGTCGATGACATGATGTTTACAGTTTCTCATGTGGTGGAGCCTGTTGAGAGGGGCATTGCAAAGATAAACAAAACCTTCCATCAGATATCAGAAAATGTGAAACGCCATGAGCAGAGGACGCAAATCGCCAAGGATGATTGTTACCTTGTTCCCTTGCGATCACGAATACCAGAATTTTCTGACGTTCATGATAGTATGGGTGATGGAAGTTTCAGTGATAGTGGCTTATCCAGTGGAAAACGACAGTATTCTCAATCAAAAACAGGAACCTCCAGAAGTAGAAGATAG 1545 0.4155 MGLMGIFCFSIFLFIPVESTGREGTMWLRNLGEESRGTVSLTVFSASIFVVAALVLSMYLVFEHLASYNQPEEQKFLIGIILMVPVYALESGREQPTPGSQLPSSWEESKCNNSFSSTDVCMVQFLSVLDSDAAFNSEIIRECYEAFALYCFERYLIACLGGEDKTIQFMESMNLTDSSIPLLKEAYAYGVVEHPFPLNLFLKDWNLGSEFYQSVKIGIVQYMILKMICAVLATILQSFGVYGEGKFEWKYGYPYLALVLNFSQTWALYCLVQFYSVIKDKLKPIKPLAKFLTFKSIVFLTWWQSVAVAFLFYVGAFRGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAEPYKRGERCVRNVAVMTDYASLGVPPDPEEVRDCQRSTRTWLGAYEREKPMKFTQSVRDVVVGSGEIIVDDMMFTVSHVVEPVERGIAKINKTFHQISENVKRHEQRTQIAKDDCYLVPLRSRIPEFSDVHDSMGDGSFSDSGLSSGKRQYSQSKTGTSRSRR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02055 514 Coils Coil 438 458 - -
Vimu1g02055 514 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 41 485 IPR005178 -
Vimu1g02055 514 MobiDBLite consensus disorder prediction 489 514 - -
Vimu1g02055 514 SMART Solute_trans_a_2 42 354 IPR005178 -
Vimu1g02055 514 MobiDBLite consensus disorder prediction 480 514 - -
Vimu1g02055 514 Pfam Organic solute transporter Ostalpha 121 354 IPR005178 -
Vimu1g02055 514 Pfam Organic solute transporter Ostalpha 44 91 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02055 Vimu-Chr1 28564948 28578157 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02055 - - gmx:100803156 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02055 1 28564948 28578157 Vimu1g02055 1 28564948 28578157 ECH