Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02041 ATGGGTCAAGAATTTTTATCCTTGTTTCAGCTGGAAACAAAGAGATTGATATGGCTTATTGGCATTACCTATGCGGTCATCTTAACTTTTCACTACCTTGAGTTTCCATATGGAACTGTTTTAGTCTCTGTGTTCTCTGCTGACAAGATACCAACGCCAGGAAGTAGTACTTTCAAGTCTTCAGATGTGGCCTCCAAATCCAAATTGGTTAGCAATGTCACACTTTTCAAGCCATCAAACTTTGCTGTTGACCATGCCTTTGAGATTGCCAATAAAACTTTGATCTTTGGGCAAAATGAGACCATTCCAAGAACTAGTTTTGTCTTGGAACCAAGACCCAAATCAACCAAATCTTTAGGACTTGATGGTTCTGACCATAGTTCCACTATCGGAAGTATTGTAAGAGCAGACAGAAAATCTGAATCACAGCAGGCAGAAGATTCTGAAACTTGCAGTTTTAACAAAACTATCAGCTTGAATTTCTCTGCAAACCGTTTCCAAGAAGACAACCTTTCATCACCTGAACAAAAATCTGAAAGTCCATTTGCTTCTTCGAGTAATGTGAGCACAGATATTACACCTGCAGTGATATCAAATGATTCCACCATATCTTTATTTCAGAATGATAACATAACTAAGGTCAATGTGCCTAGTGAGAATAAAGATTATCATACACCAATTCCAGAAGTTACAACAGTATTTGAAATGAAGAAGTTATTACTTCAAAGCCACACTTGGTATCGCTCTATGAGACCTAGGTGGTTTTCAGCTGTTGATGAAGAGCTACTGCACGCCAGATCAGAGATTGAAAATGCACCAATTGTAAAGAAGGATCCAAATTTTTATGGTCCAATTTATCATAATGTTTCCATGTTCAAGAGGAGCTATGAACTAATGGAAAAGACTCTAAAAGTGTATGTATACACGGAAGGAGCTAGGCCAATAATGCACTCGCCATTTTTCACTGGACTTTATGCTTCTGAGGGGTGGTTTATGAAGCAAATGGAAGCCAATGAAAGATTTGTAACGAGAGACCCGAAGAAGGCCCACTTGTTTTACTTACCTTTCAGTTCTAGAATGCTGGAGGAAGCATTGTATGTGCAAGGTTCTCACAGTCATAAGAACCTTATTCAATATCTGCATAACTATGTAGAAATGATTGCAGGAAAGTATACTTTCTGGAACAGAACTGGAGGTGCTGATCATTTTCTCGTTGGTTGCCATGACTGGGCCCCTGGAGAAACTAAGGTTGAAATGGCTAATTGCATAAGGGCTCTTTGTAATGCTGATGTGAAAGAAGGATTTGTTTTCGGGAAGGATGCATCTCTTCCGGAAACGTATGTCCGGAATGCTCAAATCCCCACTAGGGATCTTGGAGGAAATTCAGCTTCAAAGAGGACAATTTTGGCCTTTTTTGCAGGGAGCATGCATGGATATGTGAGGCCAATCTTGTTGCAGCACTGGGAAAACAAAGACCCTGACATGAAAATCTTTGGGAAATTGCCAAAATCAAAGGGCAACAGGAACTATATTCAGTACATGAAGAGCAGCAAGTACTGCATTTGTGCCAAAGGCTATGAAGTGAACAGTCCAAGAGTAGTGGAAGCCATTTTCTACGAATGTGTTCCTGTTATAATATCTGACAACTTTGTGCCACCATTTTACGAGGTTCTGAATTGGGAATCCTTTGCAGTTATTGTTTTGGAGAAGGATATTCCTAATCTGAAGAATATACTCCTTTCTATCCCGGAAAAGGAGTATCTTCGATTGCAGATGAGAATCAGAAAGGTGCAGCACCATTTCCTTTGGCACAGGAACCCTGTCAGGTATGATATATTTCATATGATACTTCATTCCATTTGGTACAACAGAATCTTCTCTGCACCAACTAACTCTCGATACTAG 1905 0.3974 MGQEFLSLFQLETKRLIWLIGITYAVILTFHYLEFPYGTVLVSVFSADKIPTPGSSTFKSSDVASKSKLVSNVTLFKPSNFAVDHAFEIANKTLIFGQNETIPRTSFVLEPRPKSTKSLGLDGSDHSSTIGSIVRADRKSESQQAEDSETCSFNKTISLNFSANRFQEDNLSSPEQKSESPFASSSNVSTDITPAVISNDSTISLFQNDNITKVNVPSENKDYHTPIPEVTTVFEMKKLLLQSHTWYRSMRPRWFSAVDEELLHARSEIENAPIVKKDPNFYGPIYHNVSMFKRSYELMEKTLKVYVYTEGARPIMHSPFFTGLYASEGWFMKQMEANERFVTRDPKKAHLFYLPFSSRMLEEALYVQGSHSHKNLIQYLHNYVEMIAGKYTFWNRTGGADHFLVGCHDWAPGETKVEMANCIRALCNADVKEGFVFGKDASLPETYVRNAQIPTRDLGGNSASKRTILAFFAGSMHGYVRPILLQHWENKDPDMKIFGKLPKSKGNRNYIQYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFYEVLNWESFAVIVLEKDIPNLKNILLSIPEKEYLRLQMRIRKVQHHFLWHRNPVRYDIFHMILHSIWYNRIFSAPTNSRY 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02041 634 Pfam Exostosin family 300 580 IPR040911 -
Vimu1g02041 634 MobiDBLite consensus disorder prediction 168 189 - -
Vimu1g02041 634 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 109 620 IPR004263 GO:0006486|GO:0016757
Vimu1g02041 634 MobiDBLite consensus disorder prediction 120 138 - -
Vimu1g02041 634 MobiDBLite consensus disorder prediction 113 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02041 Vimu-Chr1 28310968 28313137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02041 - - gmx:100526957 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02732 10 38723527 38726323 Vimu1g02041 1 28310968 28313137 PCT