Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02023 ATGTTCTCCAATGACTACTCTTTGATGCGGGCCCTACTGGAAATAATTGTTGAAACCATGCAAGGACCAGCTGCTGGAGTGCAAGCTGCGGAATGCTGGGCTGCTGTTTTGGAACTTCCATGTTGCTGGATTGCGTCAAGGCTTGGGCCATTTCTTCCTTCTCGGGTTGCAGCAGCTCTTGGTAACATTCAAATAGTCAAAGGTTACCGAACGGTAGTCAGCCCTAGAGGCTCTTCGCTTGCGGTAACCACATGGTTGGGATTACCGAACGATATCGATCCTGAAGGCTCTTCACTTACAATAACCACATGTATAACACTGATGATACCTAACAAACCAAAAAACTTTCCGTCGACTCCATCACCACCATCTTCAATCTTCAAGATGGCTGGTGGCCACCGGCTTTGTTCTCAGATTTTGGGATTCATTCACGCACTTCAATTTTTGTGTTCAATCACAACCGTCTACGGCATGGTCCCACAGTCCCCGGTTGAATGCAGCAGTTCAGGGTGCATTCTCCGCAACTCCTACGGTGCGTGGGGTGACCGCAGGGACTGTTCTGCCCTCAACGTGACATACCCAACCACAGAAGAACAGCTTCGTTCGGCAGTGTCCTACGCTGTCCAAAACAACCTCAAAGTCAAGGTGGTCACGAAATTTTCGCACACCATTCCCAAGTTAGCATGTCCCCAAGGGAGTTCCAGAGCAAGTGCAGGTGCCACTCTCCTCATCAGCACAGAGAAATACGACTCTGGCATCGAAATCGATGCTGCGAATATGGCAGTGACTGTGGACGCGGGTGTGGGGCTTCGGCAACTGATTGACGCGGTTGAGAGTAGAGGGTTCAGCTTGGTGGCTGCCCCTTATTGGGAGGGGGTGACAGTTGCCGGAGTTATTAGCACGGGGGCACACGGTAGTTCGTGGTGGGGTAAAGGTGGTTCTGTTCATGATCATGTTCTGGCTATTACTCTTGTAGTCCCTGCTTCCAGATCTGAAGGGTATGCAAAGGTTTTGAGGTTGGAGGCGCAGGACCCCATGCTTAATGCGGCCAAGCTGTCTCTGGGAGTTCTTGGTGCCATCTCAAAGGTAAAATTATCCATCGAGCATAGGTTCAAAAGAAGCATAAGATACAATTTCTCAGAAATAGATGATGTGATCGAAGATGTATACGCAGAGCATGCGAAAAAGTATGAATTTGCAGATATAACTTGGTATCCATCCAGGCACACAGTGGTGTACAGATATGATTCCAGGGTTCCTTTAAATGCCTCCGGTGATGGACTTAACGACTTCATTGGATTTCAACCCAATTCCATCTTGATATCAGAATCAGTTAGAACCGCAGAAAAACTACTAGAGAATAAGAGAAACGTTAATGGAAAATGCTTAACAGCAGCTACAACTTTGGGCTTCAAGAGATTAATAGGAAATGGGTTGAAGAACAATGGCCAAATCTTCAGTGGCTACCCTGTAGTGGGTTACCAAGGAAAAATGCAAACTTCAGGTTCATGCTTATATTCAACAAGATTTGACACATCATGTGCTTGGGATCCACGAATCAAAGGGCTATTTTTCTATGAGAGCACTGCAATCTTCCCTGCAACAGCATTTGGAGACTTCGTCCGTGACGTGAGAAAACTGAGAGACCTAAAACCAGAAAATTTCTGTGGGGTGGACAACTATAACGGGTTGCTAATTCGCTTCATCAAAGCCTCAAGTGCATATCTAGGGCAACCTGAGAACTCAGTAGTGGTTGATTTCAACTATTATCGTGCAAACGACCCTTCAAATCCTAGACTAAACCAAGATCTGTTAGAGGAAGTGGAACAATTGGCATTCTTCAAGTATGGGGCTAAGCCACATTGGGCAAAGAATAGGAATGTAGCATTCCTAGGGGTGCAGCATAAGTATCCAAAGTTTGACATGTTCATTGCAGCAAAACAAAAAATGGATCCTCAAAATGTGTTCTCCAGTGAATGGTCTGATGCTATACTTTATGGGAAGGAATCTGAAAAAGTTGATGGGTGTGCGTTGGAGGGACTCTGCATATGTAGCGAAGACAGACATTGCAGCCCACAAAAAGGGTTTTACTGCAGCCATGGCCTTGTCTACAAGGAAGCTAGAGTTTGTAGATATTCACAATCATCAACGTCACCGTCATCAACCATAGCATGA 2175 0.4607 MFSNDYSLMRALLEIIVETMQGPAAGVQAAECWAAVLELPCCWIASRLGPFLPSRVAAALGNIQIVKGYRTVVSPRGSSLAVTTWLGLPNDIDPEGSSLTITTCITLMIPNKPKNFPSTPSPPSSIFKMAGGHRLCSQILGFIHALQFLCSITTVYGMVPQSPVECSSSGCILRNSYGAWGDRRDCSALNVTYPTTEEQLRSAVSYAVQNNLKVKVVTKFSHTIPKLACPQGSSRASAGATLLISTEKYDSGIEIDAANMAVTVDAGVGLRQLIDAVESRGFSLVAAPYWEGVTVAGVISTGAHGSSWWGKGGSVHDHVLAITLVVPASRSEGYAKVLRLEAQDPMLNAAKLSLGVLGAISKVKLSIEHRFKRSIRYNFSEIDDVIEDVYAEHAKKYEFADITWYPSRHTVVYRYDSRVPLNASGDGLNDFIGFQPNSILISESVRTAEKLLENKRNVNGKCLTAATTLGFKRLIGNGLKNNGQIFSGYPVVGYQGKMQTSGSCLYSTRFDTSCAWDPRIKGLFFYESTAIFPATAFGDFVRDVRKLRDLKPENFCGVDNYNGLLIRFIKASSAYLGQPENSVVVDFNYYRANDPSNPRLNQDLLEEVEQLAFFKYGAKPHWAKNRNVAFLGVQHKYPKFDMFIAAKQKMDPQNVFSSEWSDAILYGKESEKVDGCALEGLCICSEDRHCSPQKGFYCSHGLVYKEARVCRYSQSSTSPSSTIA 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02023 724 Gene3D - 172 249 IPR016167 -
Vimu1g02023 724 Pfam D-arabinono-1,4-lactone oxidase 567 662 IPR007173 GO:0003885|GO:0016020
Vimu1g02023 724 SUPERFAMILY FAD-binding/transporter-associated domain-like 175 367 IPR036318 GO:0050660
Vimu1g02023 724 Gene3D - 527 627 - -
Vimu1g02023 724 Gene3D - 251 368 IPR016169 -
Vimu1g02023 724 NCBIfam FAD-dependent oxidoreductase 160 711 IPR010030 -
Vimu1g02023 724 ProSiteProfiles PCMH-type FAD-binding domain profile. 184 370 IPR016166 GO:0071949
Vimu1g02023 724 PANTHER GULONOLACTONE OXIDASE 148 692 - -
Vimu1g02023 724 FunFam L-gulonolactone oxidase 5 251 369 - -
Vimu1g02023 724 Pfam FAD binding domain 191 327 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02023 Vimu-Chr1 27742794 27750480 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02023 K00103 - gmx:100778616 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02023 1 27742794 27750480 Vimu1g02023 1 27742794 27750480 ECH