Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02005 ATGCCGTATTGCGACGTCGGAACGCTCCCATCCTCCCCCGTCGCCGACTCGCAGCTCAACAATGACATCAAAATATTCTACAGAACTTACGGTGGCGGTCCGACCAAAGTGCTCCTTATCATAGGGTTGGCTGCGACGCACGACGCGTGGGGCCCACAGATCAAAGCCCTGACAGGAACCACCGTCCCGAACGACGACGACGACGTCGTTTGGAACGGAGAAGAAGGCAATGGCGGCATCCATGTATGCGCGTTTGACAATCGCGGGGTGGGTCGCAGCTCCGTGCCTGTGGAAAAATCTGAATACTCAACCAAGATCATGGCGAAGGATGCAATTGCTTTGTTAGATCATCTGGGTTGGAAAAAAGCCCATATTTTTGGGCACTCCATGGGAGCTATGATAGCTAATAAAGTAGCAGCAATGTTTCCTGATAGAGTACTTTCCTTGGCGTTGCTCAATGTAACAGGAGGAGGTTTTCAATGCTTTCCAAAGGCACCATACCTCAATCCCTGCGAGGTGGCTTACTCATTTAATGTTTTGCAGTTGGACCGACAAACGTTCTCTGTTGCTTATCGTTTCGTGAAAGCTAAGACTCCTGAACAAAGGGCTGCTGTTGACTTGGACACCCATTATTCACAAGAGTATCTTGAGGAATATGTTGGAACAGATAAGAGGAGAGCCATCTTATATCAG 693 0.4921 MPYCDVGTLPSSPVADSQLNNDIKIFYRTYGGGPTKVLLIIGLAATHDAWGPQIKALTGTTVPNDDDDVVWNGEEGNGGIHVCAFDNRGVGRSSVPVEKSEYSTKIMAKDAIALLDHLGWKKAHIFGHSMGAMIANKVAAMFPDRVLSLALLNVTGGGFQCFPKAPYLNPCEVAYSFNVLQLDRQTFSVAYRFVKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02005 231 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN 12 221 - -
Vimu1g02005 231 Pfam alpha/beta hydrolase fold 37 154 IPR000073 -
Vimu1g02005 231 Gene3D alpha/beta hydrolase 17 228 IPR029058 -
Vimu1g02005 231 SUPERFAMILY alpha/beta-Hydrolases 21 176 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02005 37 172 Acyl Lipid Metabolism Gene Families AT3G51000 33.577 1.82e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02005 - - vum:124829757 428.713