Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01993 ATGTCGGGTGACGGAAACCTTAACCGCGTGTTGGTGTCGGTTGATGGAAGCGAGGAGAGCATGAAGGCGCTGCGTTGGGCGCTCAACAACCTCAAGCTCCGATCTCCTACTTCCGACTCCACCGATGATCCTTCTTTCATCATCTTCCACGTTCAATCTCCGCCCTCCATCGCCACTGGCCTCAATCCCGGTGCCATCCCTTTCGGTGGCCCCAGTGATATTGAAGTTCCCGCTTTCACGGCAGCCATTGAAGCACATCAAGAGCGCATCACCCGTGCCGTTCTCGATCACGCCCTCGGAATTTGCTCCCAATTCAACCTCGGCCAGAGTCAAGTCAGAACTCATGTGGTAGTTGGAGATCCAAAGGAGAAGATTTGTGAAGCTGTGCAGGATTTGCATGCTGATGTTCTTGTGATGGGATCTCGTGCATTTGGCCCCATTAAGAGGATGTTCCTCGGGAGTGTGAGCAATTACTGCGCCCACCATGCTCCATGTCCTGTCATTATTATCAAGGAAAACGACAGTGTCAATAAGATAAACTGA 543 0.5193 MSGDGNLNRVLVSVDGSEESMKALRWALNNLKLRSPTSDSTDDPSFIIFHVQSPPSIATGLNPGAIPFGGPSDIEVPAFTAAIEAHQERITRAVLDHALGICSQFNLGQSQVRTHVVVGDPKEKICEAVQDLHADVLVMGSRAFGPIKRMFLGSVSNYCAHHAPCPVIIIKENDSVNKIN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01993 180 Gene3D HUPs 4 178 IPR014729 -
Vimu1g01993 180 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 9 171 - -
Vimu1g01993 180 Pfam Universal stress protein family 8 171 IPR006016 -
Vimu1g01993 180 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 176 - -
Vimu1g01993 180 PRINTS Universal stress protein signature 7 25 IPR006015 -
Vimu1g01993 180 PRINTS Universal stress protein signature 149 171 IPR006015 -
Vimu1g01993 180 PRINTS Universal stress protein signature 131 143 IPR006015 -
Vimu1g01993 180 CDD USP_Like 9 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01993 Vimu-Chr1 26808353 26810586 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01993 - - vra:106763910 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01993 1 26808353 26810586 Vimu1g01993 1 26808353 26810586 ECH