Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01984 ATGGAGGTTGGGGTCTCCGATCCAAACCCGAACCCGGTTCGGGTGAAGCGGAAAACCCTTGAGGCCATGCTGGAACAGTGTCAGAGAGCCCTTGAACTCATCAATGCTTCCGATGGACAAAACCAAGAGCAAGAAGGGGAGGAAGAAGAAGAAGACTCTGACGAATCGCAACCTTCCACCTCCCCCGATCCAGAAACCGATCAGAAGGCTTCTCAGTCTCGTGTTGGAGGAAAAATAAGGGCTTCTTTGATGAACGGATTACTTCGAATTTTTGCATTGTGTGACCTAATCAAATCCAGAGTTGAGTGCCGTGACTTCCTTGAGAAGTTGGAGTATGCACAAGCATCAGTTTCTCTCAGTGTAGCTGGTAACAACTCAATGCTAATGGAAAAAGCTTGGGTTTTGACAGAAGAAGGTAGTTCTTGGGATCTTGTTAGCGAAAATGATCTTTGGGAAGGTGAAGGTGCTAACTCTAACTCAGAACAAGAAGATTATGTCCTTGTTAAACAAGAAGATATAGTGGAAGGAATAGCATGCTTCATGGCTGCATATTTGTTGTCCCTCAAGCAAACCAAGGATTTAACCCCAAATCAACTCCAGGATGGTGAGTTTGGTTGCTTTCTCCATAATATATGTGGTCTTATGTTAGGATATAGGACCTGTGAAGGGGATTACGCCCCTGCAATTAGACTGTTTCTTGGTTGGAAACCTATCAATTGGTCCGACCTGCCGAATCTCCAATCGGAAGGGCGACGTACGCACGAGATGGAGGGCAGAGTGTTGGCGGTAGAAGGTCAACTGGAGGCGGTAGAGATTAAGCTGGCCGAGACGAAGGCATATACGGTCTTCTTGCGGCATGAAACTGGGGCATTGAGGCAGAACTACGAGGCAATCCGCCAAGACATCCAAGCGATTCAGAAATTGTTGGGAGATCGCAAACAAGACCAACACAGGCCGTGCTGTGAGGGTAGTGAATCCTCCGTAAATGAGAATGACGGCGGACCGGAAGGGGAGAGAGGAAGAGGGGGCGGAGGAAATCGGGAAGGGTCGGCGAATTGGAGGAAACGGGTAGAATTACCTGCGTTCGAAGGGTTGAAAAGGGCGCTGGTGGTCCGATTCGGAGAAGGCAGCCGAGGGTCCGTCTATGAGAGGTTGGCCGCCATTAAACAGGTAGGCACAGTTAACGGGTATGTCCGGGACTTCGAAGTACTCGTGGGGCAGACGACTAGGATTCCGGAAGAGCAACTCTTAGGATACTTCATGGCAGGTCTCCAGGAGGAAGTGAGCGATCAAGTGAGACCCCACGACCCACAAGACCTTATGTCCGCCATGAGAGTCACTCGTGACGTCGAGAAATTGAGGCGGACAATCCGCCAAGAATTTGGGTTCTTGGGAGGGGGCGGCGGAAGTCGTATCAAGAAGCAAACCCAGGGTAATGGCGGAAAGCACGAGGTCAATAAAGAGAGAGACGACCCAGGCCAGCGGAATAGTAAGGCCAAATGTCAAAGAGAAAGGAAGAAGGCCGTTCAGTCTCGGCCACCGTTGTCAGGAAAGAGGATTGAGGGTGCTGATATTGGCCGAAGAAGAAGAGGAAAATTTGCCACCACTCAAGGCAAAGCCAGTGGGTTTCCTTCATATGGTAACCCGATGAGGAAGAGGAGCCATGAGACCAAGCTTCTCCATTCCAACCTGAGGACAAGGTTGTTCTGA 1710 0.5006 MEVGVSDPNPNPVRVKRKTLEAMLEQCQRALELINASDGQNQEQEGEEEEEDSDESQPSTSPDPETDQKASQSRVGGKIRASLMNGLLRIFALCDLIKSRVECRDFLEKLEYAQASVSLSVAGNNSMLMEKAWVLTEEGSSWDLVSENDLWEGEGANSNSEQEDYVLVKQEDIVEGIACFMAAYLLSLKQTKDLTPNQLQDGEFGCFLHNICGLMLGYRTCEGDYAPAIRLFLGWKPINWSDLPNLQSEGRRTHEMEGRVLAVEGQLEAVEIKLAETKAYTVFLRHETGALRQNYEAIRQDIQAIQKLLGDRKQDQHRPCCEGSESSVNENDGGPEGERGRGGGGNREGSANWRKRVELPAFEGLKRALVVRFGEGSRGSVYERLAAIKQVGTVNGYVRDFEVLVGQTTRIPEEQLLGYFMAGLQEEVSDQVRPHDPQDLMSAMRVTRDVEKLRRTIRQEFGFLGGGGGSRIKKQTQGNGGKHEVNKERDDPGQRNSKAKCQRERKKAVQSRPPLSGKRIEGADIGRRRRGKFATTQGKASGFPSYGNPMRKRSHETKLLHSNLRTRLF 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01984 569 PANTHER RING FINGER PROTEIN 9 201 - -
Vimu1g01984 569 MobiDBLite consensus disorder prediction 59 75 - -
Vimu1g01984 569 Coils Coil 17 37 - -
Vimu1g01984 569 MobiDBLite consensus disorder prediction 315 352 - -
Vimu1g01984 569 MobiDBLite consensus disorder prediction 477 511 - -
Vimu1g01984 569 MobiDBLite consensus disorder prediction 42 58 - -
Vimu1g01984 569 MobiDBLite consensus disorder prediction 461 552 - -
Vimu1g01984 569 MobiDBLite consensus disorder prediction 31 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01984 Vimu-Chr1 26614722 26618263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01984 - - vun:114193178 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01984 1 26614722 26618263 Vimu1g01984 1 26614722 26618263 ECH