Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01981 ATGATCGGCATAAATGAGACATACGCGGCACGTCGAGACACACAGAGACAAAGAAAAGAAGCACTGGTTCGATTATTTCCCTTTTATCTCTTGGGTTCTGTCAGCCCCTTTCTTAGCGCTCACAAACTCAACACCATCATGATGTGGGAATGGGGCGATTACGAAGACGCCATCCCAGAATCCGACCAACCCGAACCCGATTCTCATCTCAACTTCGATTTCTTCTCCACCCTCGCCAAACCCAAGGATTATTATAAGATACTGGAAGTGGATTATGATGCTACGGACGATGATATTCGCTCCAATTACATTCGTCTTGCTCTGGTGTGTTCTGTTGTAAGCGTTTTCCTTTTGTTGGGGTTTCCGATTGGGGCTAATGTGGGTGTGGTTGTGCGCGCAGAAGTGGCACCCGGACAAGCAGAAAGACCAGGATTCTACTACCTCGCGATTCCAAGACATAAACGAGGCCTACCAGGGTATGTATGTATCTGTCTGAATTTGTTTTTAGGGTTAGGGATAAGGATGCCATCGTTGTTTATAGCGTGGGAGATTCTATTTTGA 561 0.4635 MIGINETYAARRDTQRQRKEALVRLFPFYLLGSVSPFLSAHKLNTIMMWEWGDYEDAIPESDQPEPDSHLNFDFFSTLAKPKDYYKILEVDYDATDDDIRSNYIRLALVCSVVSVFLLLGFPIGANVGVVVRAEVAPGQAERPGFYYLAIPRHKRGLPGYVCICLNLFLGLGIRMPSLFIAWEILF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01981 186 SUPERFAMILY Chaperone J-domain 75 110 IPR036869 -
Vimu1g01981 186 Gene3D DnaJ domain 63 111 IPR036869 -
Vimu1g01981 186 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 48 110 - -
Vimu1g01981 186 CDD DnaJ 83 110 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01981 Vimu-Chr1 26560734 26561524 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01981 - - var:108338470 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01981 1 26560734 26561524 Vimu1g01981 1 26560734 26561524 ECH