Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01915 ATGGGTGTCTCCTTCCTCTCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTCCACCAGATACCACCCTCGTTCAGTTCCCATTTGTTGTAATAAAACCATAAGCGATGTTGTTGGTGAAGAGCCGTTCCATTGGAGAAGGAGAGAGGTTCTTAAATGCGTTGGGGCAACCATTGGCTTGGAAATAATTGGGAGCTCCGGATCACTAGTTGGAATGGCTAATGCAGCTGACTTGATAGAGCGAAGACAGCGTTCTGAATTTCAGTCTCAAGTCAAGGGAACACTTTTTAAAGCCATAAAGGGAAATCCTGATATTATTCCATCCTTACTGAAACTGGCTCTAAATGATGCTTTGACTTATGAGAAGGCAACAAAATCGGGTGGTCCAAATGGCTCTATACGGTTCAGCTCAGAAATAAGTAGACCAGAAAATACAGGGCTTTCTCCTGCCTTAAATTTGTTAGAGGAAGCAAAAAAGGAAATAGACTCATATTCCAAAGGTGGACCCATTTCCTATGCAGATCTGATCAACTATGCAGCACAAAGTGCTGTCAAGGCCACATTTTTAGCTGCTGCCATTAGCAAATGTGGTGGAAATGAGGAGAAAGGAAATATCCTGTACAATGCATACGGATCAAATGGGCAGTGGGGCTTGTTTGATAGGCAATTTGGTAGGGTTGATGCTCAAGACCCGGACCCAGAGGGTAGAGTTCCAATATGGGAGAAGGCAAGTGTGCAGGAAATGAAAGACAAATTTGCTGCTGTCGGATTTGGTCCTCGCCAGCTGGCTGTTTTGTCTGCGTTCTTGGGGCCTGATCAGAGTGCAACAGAAACTTTATTGGCGAGTGATCCTGATGTTGCTCCTTGGGTACAGAAATACCAGAGGAGCCGTGAAACGGTCTCTCGGACAGATTATGAGGTTGATTTGATAACTACTTTCACAAAACTTAGTACCTTGGGCCAGCAAATCAACTACGAGGCATATACATATCCTCGCGCAAAGATTGACATTACCAAACTAAAATTGTGA 1044 0.4435 MGVSFLSTCPSLLSLVANDTPPSTRYHPRSVPICCNKTISDVVGEEPFHWRRREVLKCVGATIGLEIIGSSGSLVGMANAADLIERRQRSEFQSQVKGTLFKAIKGNPDIIPSLLKLALNDALTYEKATKSGGPNGSIRFSSEISRPENTGLSPALNLLEEAKKEIDSYSKGGPISYADLINYAAQSAVKATFLAAAISKCGGNEEKGNILYNAYGSNGQWGLFDRQFGRVDAQDPDPEGRVPIWEKASVQEMKDKFAAVGFGPRQLAVLSAFLGPDQSATETLLASDPDVAPWVQKYQRSRETVSRTDYEVDLITTFTKLSTLGQQINYEAYTYPRAKIDITKLKL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01915 347 Gene3D - 247 312 - -
Vimu1g01915 347 FunFam Thylakoid lumenal 29 kDa protein, chloroplastic 248 312 - -
Vimu1g01915 347 FunFam thylakoid lumenal 29 kDa protein, chloroplastic 79 247 - -
Vimu1g01915 347 Gene3D - 78 246 - -
Vimu1g01915 347 CDD plant_peroxidase_like 96 344 - -
Vimu1g01915 347 Pfam Peroxidase 97 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01915 347 PRINTS Plant ascorbate peroxidase signature 111 126 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu1g01915 347 PRINTS Plant ascorbate peroxidase signature 143 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu1g01915 347 PRINTS Plant ascorbate peroxidase signature 129 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu1g01915 347 ProSiteProfiles Plant heme peroxidase family profile. 91 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01915 347 SUPERFAMILY Heme-dependent peroxidases 81 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu1g01915 347 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 52 337 IPR044831 GO:0004601|GO:0034599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01915 - - gmx:100795192 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01915 1 24358837 24364638 Vimu1g01915 1 24358837 24364638 ECH