Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01905 ATGGAAAAGAGCAAAATTCAAATGCTTTATGATGCTTCTCATGCCCTGTTCTCTCAAAAGGAGCTTCCAACTTTTCAACAAATCCATTATGTAAAAGATTTGCTAGACAAGATCGAAGCTATAGATGTGGGAATCGACGATTTGGGGATGTGTGATTCTCCTGTGTCAGATGCAAGTGGTGATAACAGCAAGGGATTGCTTTGTGGAAAAAGTTTCTCTGAGATTACATACATTCACATTCATGAATGTGACAATTTCTCTATGGGTGTGTTCTGTCTTCCAGCAGGAAAAGTATTTCCCCTTCACGATCACCCAGAAATGACAGTGTTGAGTAAGCTGTTGTACGGTTCTGCGTATGTTAAAGCTTATGACTGGATTGCATTGGATTGTTCTGGAACCCAAACTGGATTAGGTGGGAAGGTTGTGGATGAAGTAATGAAAGCACCACATGAGCCATCTATATTGTTTCCAAGAAGTGGTGGCAATATTCATTCTTTCACAGCGTTGACACCTTGTGCAATACTAGATGTGCTTTCTCCACCATATTCTGAAGACTTTGGAAGGCCTTCTACTTACTTTTCAGATATTCCTATTCCTTCTCTTCATGGTTATGCTATACTTGAAGAGAAACCCATGCCTAGTGACCTAGTTGTTCGAGGAGCACCTTATATTGGACCTCCAATTGTACCAGCGAACGAATACCAATTTTGA 711 0.4051 MEKSKIQMLYDASHALFSQKELPTFQQIHYVKDLLDKIEAIDVGIDDLGMCDSPVSDASGDNSKGLLCGKSFSEITYIHIHECDNFSMGVFCLPAGKVFPLHDHPEMTVLSKLLYGSAYVKAYDWIALDCSGTQTGLGGKVVDEVMKAPHEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEDFGRPSTYFSDIPIPSLHGYAILEEKPMPSDLVVRGAPYIGPPIVPANEYQF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01905 236 CDD cupin_ADO 84 183 - -
Vimu1g01905 236 SUPERFAMILY RmlC-like cupins 4 193 IPR011051 -
Vimu1g01905 236 Pfam PCO_ADO 34 228 IPR012864 GO:0016702
Vimu1g01905 236 PANTHER UNCHARACTERIZED 6 228 IPR012864 GO:0016702
Vimu1g01905 236 Gene3D Jelly Rolls 58 195 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01905 Vimu-Chr1 24072889 24074314 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01905 K23953 - gmx:100811165 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01905 1 24072889 24074314 Vimu1g01905 1 24072889 24074314 ECH