Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01896 ATGGCAACCGTTCTTTTGAAAATCTTCTTTCTCTTATCTATCTTCAACATCTCTTTGGCTACAAGGAGGTTGAATGAGTTGGTGCAGAATCCTAGTCAGCTTCTTCACTACCATAATGGTCCTCTTCTTTCTGGCAAAATCTCAATCAACCTCATTTGGTACGGTCACTTCAAACCTTCCCAGAAGGCAATAGTCTCCGATTTCATCACCTCACTCTCACCTTCACCCTCTCCACCACAGACCATCCAACCATCCGTCGTCTCGTGGTGGAAAACCACCGAGAAATACTACCACCTCAGCAGTAACAAAAAAGCCACCCGTAAACTTTCCTTTTCTCTCAACAAACAGATTCTGGACGAAAGCTACTCGCTTGGGAAATCCCTCACCAACAAGCACCTCATTGAGTTGGCTTCAAAGGGTGAACACAGAAACGCCGTCAATGTGGTTTTGACCTCGGCTGACGTGGCAGTTGAGGGCTTCTGCATGAGCCGATGCGGAACCCACGGTTCCTCCTCGACGGCGCGTACCAAGGGGAACGACAAGAGCTACAAATTTGCTTACATTTGGGTTGGGAACTCCGAGACTCAGTGCCCGGGTCAATGCGCTTGGCCGTTTCACCAACCGATTTATGGGCCGCAGAGCCCACCGTTGGTGGCGCCTAACAACGATGTGGGCATCGACGGGATGGTTATCAACCTGGCGAGCCTGTTGGCTGGGACGGCGACGAACCCGTTTGGGAATGGGTTCTTCCAAGGGCCGGCGGAGGCGCCGTTGGAAGCCGCGTCGGCTTGCCCTGGTGTTTATGGCAAAGGGGCATACCCTGGTTACGCCGGAAACTTGCTGGTGGATTCTTCCACTGGCGCTAGCTACAATGCTCATGGTGCTAATGGAAGGAAGTACCTACTTCCTTCTTTGTATGACCCTTCCACGTCATCGTGCTCCACCCTAGTTTGA 954 0.5178 MATVLLKIFFLLSIFNISLATRRLNELVQNPSQLLHYHNGPLLSGKISINLIWYGHFKPSQKAIVSDFITSLSPSPSPPQTIQPSVVSWWKTTEKYYHLSSNKKATRKLSFSLNKQILDESYSLGKSLTNKHLIELASKGEHRNAVNVVLTSADVAVEGFCMSRCGTHGSSSTARTKGNDKSYKFAYIWVGNSETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGIDGMVINLASLLAGTATNPFGNGFFQGPAEAPLEAASACPGVYGKGAYPGYAGNLLVDSSTGASYNAHGANGRKYLLPSLYDPSTSSCSTLV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01896 317 Pfam Phosphate-induced protein 1 conserved region 35 316 IPR006766 -
Vimu1g01896 317 PANTHER PROTEIN EXORDIUM-LIKE 5 10 317 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01896 Vimu-Chr1 23882012 23882965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01896 - - gmx:100791695 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01896 1 23882012 23882965 Vimu1g01896 1 23882012 23882965 ECH
Vimu1g01896 1 23882012 23882965 Vimu10g02503 10 36226637 36227572 PCT