Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01881 ATGAGTGTCTTACCTTCTTGCTCTCGCTGCCCACAATCAGCGGTTGTCTATGTGGCCCTCATTTTTGCTCTGTTCCAACAAACTTGCAGTGCCAAGCATCACACATCCTGTCCATCTTCTTCATGCGGAGAAATTGGCGAAATAAAATATCCATTCCGACTGAAAGGCGACCCTGGCGGTTGCGGCCTCCCCAGCTACGAACTTGATTGCGTGAATAACAGAACACTAATTACTCTGTTTTCAGGGAAATACTATGTGAAGGAAATCAATTACGATAGATACGACATCCGGGTGCTTGATTCGGGTGTTGTGGAGGACACTTCTTGCTCTTTTCCTCGCTATTTCTTATCCTACAGAAATTTCAGTGGACATGATACTGATCGGCTTAATTTGGTCTGTGGTGATTTTTATGCAACAGTAGTGTTTCTAAACTGTAGTGACCGAGTGGGTGATGATCCGCGATATGTGGAAGTGAAAGCCGGCTGTTGTGACTCCGGAGGCGTTATCTACGCCGTTCATCATGTTACGGGATTTACAGTGATGGATGTGAAGGCCGGGTGCAGCTTAAAGATTGGTACCTTGGCAAACGGGAGAGGTTTCAGTGAGGTGTTTTATACAAACAAGACACATGGCAGGAACGTTTCCTATGCTGATATCGTCCAATATCTGGAAGAAGGGTTTTGGTTGTCTTGGTTTCCTCTTGTTTGCAGGAACCACGGTGGAAAGGGTATCCACTGTGACCTCAATCACACCACCCAACAAATTCAATGCAATTATTGTACAGTGATCAACTACCGTACCCACAATTTTGGTGAGATATATATTCTTCTATACCTCTTCTGTCTGCCCCTTTCCTAA 858 0.4499 MSVLPSCSRCPQSAVVYVALIFALFQQTCSAKHHTSCPSSSCGEIGEIKYPFRLKGDPGGCGLPSYELDCVNNRTLITLFSGKYYVKEINYDRYDIRVLDSGVVEDTSCSFPRYFLSYRNFSGHDTDRLNLVCGDFYATVVFLNCSDRVGDDPRYVEVKAGCCDSGGVIYAVHHVTGFTVMDVKAGCSLKIGTLANGRGFSEVFYTNKTHGRNVSYADIVQYLEEGFWLSWFPLVCRNHGGKGIHCDLNHTTQQIQCNYCTVINYRTHNFGEIYILLYLFCLPLS 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01881 285 PANTHER OS01G0690200 PROTEIN 20 260 - -
Vimu1g01881 285 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu1g01881 Vimu-Chr1 23403649 23404506 Dispersed/Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01881 - - vra:106763492 343.584