Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01874 ATGAGTGTCTTACCTTCTTGCTCTCGCTGCCCACAATCAGTTGTTGTCTCTGTGGCCCTCATATTTGCTCTGTTCCAACAAACTTGCAGTGCCAAGCATCGCACATCCTGTCCATCTTCTTCATGTGGGGAAATTGGCGAAATAAAATATCCATTCCGACTGAAAGGCGACCCTGGCGGTTGCGGCCTCCCCAGCTACGAACTTGCTTGCGTGAATAACAGAACACTGTTTACTCTGTTTTCAGGGAACTACTATGTGAAGGAAATCAATTATGATATTTACCACATCCGGGTGATTGATCTGGGTGTTGTTCAGGACACTTCGTGCTCTTTTCCTCGCTATTTCTTATCCAATCGAAATTTCAGTGAATATTATTTTAATAATGATCCGCTGACTTTTTCGGATGATTATTTTACTACAGGAGTAGTGTTTCTAAACTGTAGTAAACGAGTTGGTGATGATCCGCGATATGTGGAAGTGAAAGCCGGCTGTTGTGACTCCAGAGGCGTTACCTACGCGGTTGATCTTGGTACGGGATTTACAGTGATGGATGTGAAGGCCGGGTGCAGCTTAAAGATTGGTACCTTGGCAAACGGGAGAGGAACCACTGTGGAAAGGGTATCGTGTGTGCCCTCAATCACACCACCCAACAAATTCAATGCGATTATTGTCAAATCTATAACCACCCCACCCACAATTGTGGTGAGATATATTCTTCTATACCTCTGCTGTCTGCCCCTTTCCTAA 747 0.4485 MSVLPSCSRCPQSVVVSVALIFALFQQTCSAKHRTSCPSSSCGEIGEIKYPFRLKGDPGGCGLPSYELACVNNRTLFTLFSGNYYVKEINYDIYHIRVIDLGVVQDTSCSFPRYFLSNRNFSEYYFNNDPLTFSDDYFTTGVVFLNCSKRVGDDPRYVEVKAGCCDSRGVTYAVDLGTGFTVMDVKAGCSLKIGTLANGRGTTVERVSCVPSITPPNKFNAIIVKSITTPPTIVVRYILLYLCCLPLS 248
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01874 248 PANTHER OS01G0690200 PROTEIN 19 191 - -
Vimu1g01874 248 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu1g01874 Vimu-Chr1 23297232 23298093 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01874 - - vun:114195038 271.552