Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01857 ATGAAGGGAAGAAAAAAGAAAAGCAAAAAGAGAGGGATAATCCATTCCTTACCTTCGAAGAGAAGGAGAAATTTCAATGACTCCTTATTTGTTGTTGAAGGTTTTGCAATGAAGATTTGTGGTGAAGAAGATGATCTCACCGTAGATGGTGTGACGACGACACTAGGATTCGCATTGATGGTTGAAGATGACGACGATTTACGGTTGATGGTGGTGGAGAAAGGGTTTGGTGGCAACAAGGTTGGTGATAGCAGCAACAAGGTTGGTGGTGATAGAATTAAGACAATGTGCAGGGACTATGAACAAGAAAAGAGAGAACTCATCAAAGCCCTTGTAAAGGACCGAAAACTTTCTGACATCCCCAAGATATCTCAGCCAACATTAATAATCTGGGGAGAACATGATCAAGTATTTCCTTTAGAACTGGGACACAGATTGAAAAGGCATTTAGGGGACAATGCTGAACTAGTTGTCATTAAGAAGGCGGGGCATGCTTTTTGTGCGGAGAAGGCCAATGAGTTCTTCAGCATCTTCAAGTCTTATCTGTTGGATTTCCAGGCTTTTGCGTTCTGCGTCTCTATGTTTGTTCATATACTTTTATGGATGATAAGAAATATAAACAAAATACTCCCTGTGGGTTTCATCTACAAAGCCTTAGATCGAGTAATTCAAAAAAGTTTGGTGTTCCGGTTGGATACATCTCCTGAATTTCCTTACACAATTTCTCGTCTTCAATCGTTTGGTTCGTATTCCTTTCCTTCCGGTTGCTTCTTGCTGACGTCGATTTCTGGAGTCCCTGCTGTCAAGTCCGGTCGGGTACTTGCTAAAGGCACTCCGACCCTCAACCTCCTTTCGCCACAATTGGGTTCGTCCAACCGTCCGTCGCAGCGGTGCGGCCGGTTGTTGCCTGCTGACATTCGTGACACTGCGACCTTAAGAGGTTATGCAAATCTTCTTGAAGACCCTTTAACGTTTGCTAGGATGTCGTTCGTCCGATACGATATGACGCTCGTGTTAAGAGGTTATGCAGATCTTCGTGAAAACCCTTTAACGTTCGCTAGGACGCCATCCGTCTGGTACGAAATGGCGCTCGTGTTATCCATGCCTGAACGACTGGGATGCGTAGCTCCTGACCACGCTGGTCAAGGGTACGTTCTCCGCCGAGCGGGTCTTACTCGTTGGGCGCCCGGTCTGTCTTTGGGTCCTCCAAGCCCGAGACAACCGGTTGGTGTAGGGTTTGAGAGCAGCCTGCTGTCGAGTAAGCTAGTCATGGCGGTTTTTGGTCTAGGTGATGTGACTCCTATTAATGACGGTTATGACGCTTCGAAAATGCTGTGGCGGATCGTCGCTTCGAATTTTGCGCATACTTTGGGCGGGAAAAGACACGTGGCATCCATAAGAGGTTTACATTTGTTGGGAAACCGTAACGTCCTCGATCTGAGCCGTTGGTCGTGGGAGTCTTGGACAGTGATGATTCGTGGCAGTTACCCTCCCCAACTCTATCGTGATTCTTTCTTCTTCTCAGGTAATAAAACGATGATTGTCTGTGTTGAGTCCTCTCTGGAGTCGTCAGGCCGCGGTGGAGACGGCGGGGGCGTCGGTGGTGGCAATGTTAACGGGTCGTTTGCGTCTAGTGAGTCGTCGGGTTCCGACAGTAACTCCCCCCAGCGACCATCGTTGGGGGAGGCGGAAGGGGTGGCTAAACCACCAGTTGCAGATGGAAACGACGGTGAAGTTCGCGGGCCAACTTCAGTGGTCTCAAAGGGGCAGATCTTTCACGGGGCCCCCATCTTTTTAGTGCAAGGGGGTGTGACCGTGGATCCGGTCGCTCTCGCTCCGGTCGGCTTTGATGTAAATACTCAGGTGTCTTGTTTCTCACACACCGGTCTTCAAGATTTTATAGACCAATCATACATAGGGAGAGACACAGCGGACACCCAGGCAATAAGGGTTGCCGTTAGTCGGGAGAACGAGCGGGTCTGCCATGGGAAAGGTTCCGGTTCTGAAGACTATTTCTTCATGTACGCGAACCTCTTTACCCAATTGCACGTCCGCGTCCCCTTCACCGATTTCCAGATGGAGTTACTACGGGAATTGAACGTAGCGCCCACGCAACTTCATCCGAACGCATGGGCCACCGCCCAAGCCTTCGTTGTCGAGTGCATGGTGGCTGGCGTTCCGCCAACCGTTCGTTCCTTTCTGCACTACTTTGATGTCCGTCCCTCTCCCAAGGGCGGTTGGGTTTCCCTTATCTCTGTGGCGGATCGGACTTTGTTCAAGCCCTATTCTGAGTCCTTCAAGAACTTTAAAGAGCAGTTTTTTAAGGTCGTTGTGACCGATGCCGATCATCGGGAGTTTTTAGACCCGGAGGGTTCTCCATTGTTCCCTCTATATTGGACAGAGAACCCTCGCAAAGTGAAGGCTTACGCCAAGCGCGAGTTGCAGATAGAGGATCTCTACGTGGTGGACATCATCGAAACCTTGCCATGCCGCACCCCGGCTCGCTGCCTGGTCGATTGCATTCCCTTCGAGGACTGCGCTCAGAGAGCACTCGATTGCATGGCTGCCCCTGGACCCCGCCAATCCAACTTCTTGGACGCTAAACGGGAGTCTGCTCGGGCTGCTACCCTTACCAAAGATCAAGCTCTTCCTCCCCCCAAGCGTCCTCCTTCCGCTGCCGCCCGGGTAACCATTGCGTCATTCGGGTCCCCCAAGGATACTCCTGCCAATGGCGCCATTTTGACAAAAGCTTCTCAACTGTCGGCCGGGGAAGGTGTATCTGCTCCTTCCAATATCCATTCTATTGGGTTGTCCTCCCTGCTGCCGAAGTGGCCTCTCAATTGGCCCCGATACCTGCGTCGACATCAATTCGGAGGAAAAGAAAGTCTCAGAAAGGAAGTAAGTCTTCCTCCAAAAAATGTCGACGGGAGGGCACTGAGCCGGCCCCCTGAGTACAACGTGGGCCGGTTTATTGACTTCAACAGAGGGCCCGCCTATTGGTCTCTATTGGAATCGTTGCTCGGGCCCGCCATGCTAGATTCTATTTTTGAGATGGCCAGCAGGATTGCCTCGATGGTTGGGTATGTCCGAGAGTTCGACGATTTTAGAGGCTTTGTTGAAAGAGCAAGAGAAAACAACAGCCCTGGAAGCGGAGCTAGAGGGTATGCGGAAGTCTCTCGAAGAAGAAAGCTGAAGCTGGCGGCTGCTGAGCAGAAAGAGATCGAGCGAAGGCTCCAGGGGAGAACTATGGAGCTACATACCGACTTGGGTGCAGTCCGGGCAGATCTGAAGGTCGCGCAGAAGAGGATATCTAAACTTAATGATACCTTGGTGGTGGAGCATGAAGATGGGTTTTACAAGGCCTTAAGGCAGGTGGTCGTGCTTCTCCATGTAGATAAGCCCCTCGAACTTGGCTTTGATTTGTATAAGGATGTATATGATGGCGTACTGATGGAGATCGAGCCGTCGGGCACTGCGACCGTTGGGGCCGAAACTATTGCGGGTTCTACAAGTGCTGTCGTTGACAATGTTGAAAAATAG 3540 0.5068 MKGRKKKSKKRGIIHSLPSKRRRNFNDSLFVVEGFAMKICGEEDDLTVDGVTTTLGFALMVEDDDDLRLMVVEKGFGGNKVGDSSNKVGGDRIKTMCRDYEQEKRELIKALVKDRKLSDIPKISQPTLIIWGEHDQVFPLELGHRLKRHLGDNAELVVIKKAGHAFCAEKANEFFSIFKSYLLDFQAFAFCVSMFVHILLWMIRNINKILPVGFIYKALDRVIQKSLVFRLDTSPEFPYTISRLQSFGSYSFPSGCFLLTSISGVPAVKSGRVLAKGTPTLNLLSPQLGSSNRPSQRCGRLLPADIRDTATLRGYANLLEDPLTFARMSFVRYDMTLVLRGYADLRENPLTFARTPSVWYEMALVLSMPERLGCVAPDHAGQGYVLRRAGLTRWAPGLSLGPPSPRQPVGVGFESSLLSSKLVMAVFGLGDVTPINDGYDASKMLWRIVASNFAHTLGGKRHVASIRGLHLLGNRNVLDLSRWSWESWTVMIRGSYPPQLYRDSFFFSGNKTMIVCVESSLESSGRGGDGGGVGGGNVNGSFASSESSGSDSNSPQRPSLGEAEGVAKPPVADGNDGEVRGPTSVVSKGQIFHGAPIFLVQGGVTVDPVALAPVGFDVNTQVSCFSHTGLQDFIDQSYIGRDTADTQAIRVAVSRENERVCHGKGSGSEDYFFMYANLFTQLHVRVPFTDFQMELLRELNVAPTQLHPNAWATAQAFVVECMVAGVPPTVRSFLHYFDVRPSPKGGWVSLISVADRTLFKPYSESFKNFKEQFFKVVVTDADHREFLDPEGSPLFPLYWTENPRKVKAYAKRELQIEDLYVVDIIETLPCRTPARCLVDCIPFEDCAQRALDCMAAPGPRQSNFLDAKRESARAATLTKDQALPPPKRPPSAAARVTIASFGSPKDTPANGAILTKASQLSAGEGVSAPSNIHSIGLSSLLPKWPLNWPRYLRRHQFGGKESLRKEVSLPPKNVDGRALSRPPEYNVGRFIDFNRGPAYWSLLESLLGPAMLDSIFEMASRIASMVGYVREFDDFRGFVERARENNSPGSGARGYAEVSRRRKLKLAAAEQKEIERRLQGRTMELHTDLGAVRADLKVAQKRISKLNDTLVVEHEDGFYKALRQVVVLLHVDKPLELGFDLYKDVYDGVLMEIEPSGTATVGAETIAGSTSAVVDNVEK 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01857 1179 MobiDBLite consensus disorder prediction 523 583 - -
Vimu1g01857 1179 SUPERFAMILY alpha/beta-Hydrolases 107 182 IPR029058 -
Vimu1g01857 1179 MobiDBLite consensus disorder prediction 538 559 - -
Vimu1g01857 1179 Gene3D alpha/beta hydrolase 54 183 IPR029058 -
Vimu1g01857 1179 PANTHER SI:DKEY-122A22.2 95 183 - -
Vimu1g01857 1179 MobiDBLite consensus disorder prediction 868 891 - -
Vimu1g01857 1179 Pfam Putative gypsy type transposon 682 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01857 Vimu-Chr1 22802534 22810329 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01857 - - vra:111241662 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01857 1 22802534 22810329 Vimu1g01857 1 22802534 22810329 ECH