Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01850 ATGCAGAAGAAGCTAGCATTCCCAGTCTCCAAGAGCCTGGACCAATTCAAATCGTTGTACGGTTCCATTTCGGGAGCTTCCAAGCCATTATCTTCGCGTCCTTCTGTGGATACCGTTTCATCGGGGAGTTTTGCAAACCTGAAGCTCACCGCAGAGAAATTGGTGAAAGAGCAAGCTTCGGCGAAGACTGATCTTGAAAATGCGAATGCTAAGCTTAAGAAGTCGCAGGAGTGTGTGCGCGCATTGGAAGAAAAATTGCAGAATGCTTTAAACGAAAATGCCAAACTCCAGGTCAAGCAGAAGGAAGATGAGAAACTGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTATGTGATCAACTTACGGAGACTTTACAGAAGTTGGCTGGTCTGGTTCAGGATGCCGAAAAAGATAAGGAGACATTGGAAAATAAACTGTCAGCAAGTTCAAAAACTCTTGATAGCTTGAGTAAACAGATGGATGGTTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGAACCCGTGATAACGAACTAGAGAAGCTCAAATTTGCTTCAGAAGAAAAGGAGAAATTTCACAGAGATGAACACTGCAGAGTTGCCAATGTTATAGAAGAGAAAGATAATATGATAAGGAATTTTGAAGAAATCTTAGCATCTAGTAGATTGGCTACAGAGAATTTGAACTCAACTTTGGAAGAGGTTCACCTTCAGTTAAAAGTTAAAGAAGATGAAATTATGCGTCACATAAATAGTCAAGAGAAATTGGAGAAAGAAAAGAGTGATCTTCAATTGCTGAATGCTGGGCTTGCAGAAAAGCATGAGATGTCACTTCAGGAAATTGAAAACCTTAAAGAAACACTTCAGTCTTTGGCTGCAGATTTGTCAAATTTAGACAAAGAAAGCCTGAATCTTTTGAGCAAGTTTGATGAAATGAATTTACTCTATGCTTCTTGCTTCCAGTTGGTTCAGAAGGAGAGAGAAACTTTCTCAAAACATGCTCAATACCAGTATAGTGAGCTTAATAACAAATCTGTAGTCCTGGAATTAGAAAAGAACGCAACTCAAATGAAAAATTACGAGTTAAACAAAACTGTGGATGAACTTCGGAAAGTTCAAGAATCTACCGTAGCCCAACGTACAGAGGACTCTCGATTAGCTGCTGAGAGAATTCAAAGTTTGGTGTCAGAAACTGAGACTTTAGTCTCAAAAAAGAAAGAAGCAGAGGTATTAATTTCCAAATTAGAAGAGAAAGTTGAACTTCTATTAGAAAGTTCTAGATCATCAGACAACCACGTGCAAGACTTGCTGCTGAAGGTTTCAGCAATAGAGACTGAAAGCAAAGAAAATACCGAAAGACTACAGGCAGAGATATTGAAGAAATCAGAGGAAATAGATACTTTGCAAAAGGAGAGAATAAAACTAGAGAAGCATGCTGATTCTCTTGGTCAAGAAGTAATCCAGCTTCATAATGCCCTGGAGGAAAAAGAACAGTGTGTTTTACATTGTAAGGAACAGGAAAAGAAGCTACAAGATCAAATCACAGAGAACACATCATTGTTGACTGCTGTTGAAAGCAAACTTTCAGAAGCTAGGAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATCAATGACATTAAGAGGAAGTATGAATTGGAGAAGATGGAAATTGTGAATATGGAAAAGGACAAGACAGACAAAACTATTACCGAAATTGAGGGAAGATGTGATAAAAAAATTGCAGAATGCAACGAAGAATCAAGGCAGCAGTTGATGCGTATTCAGGAAGAAAACACGTTGCTGGTTAATCAAATGCAGCAGGAGCATGACAAGAGGCAACTAAGCCTCATATCTGAGCACAATGAACAGCTAAAGCGTACCCAACTGCTAGCTGAAAATGAACTGCGAGAGAAAACAATCTTTATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGATGTGAACTTGAAGATGAATGTCGGAAGCTAGAAGAGGAGTTGCATCTTCAAAAATCCAAAGAAGACAGACAAAGGGCTTTGTTGCAGTTGCAATGGAAAGTGATGAGTGACAAACCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCAATTAAGAGAAGGAGTTCTTGTGGTGGCAAAAGAAATCTGCAGCGTGACTTAGACTCTCCTTACTTTGAAGCAACACAAACACCAGTGCCAAAGTTGTTGACAAAAGTGGACAACATTAAAACAGGAAGTGCAGTGAGCATACCTAAGCGTCATAGAAAGCAGGTAACTCGCCATGAATATGAAGTTGAGACTTCTAACGGAAGAACAATCACAAAGAAAAGGAAAACAAGAAGTACTGTTATGTTTGAGGCATGTATTTGTTTTTCTCTAAATTCTATTAACCATCTATATATATGGGATCCTAGAAATCGAAAGATAAATACACCAAAAGTAAATACTCCTGGAAGTGTTGTTAAGAGCATCAAAGGAGGAGGACATACTAATCCTTCAAATATAGGTGATTTGTTTTCAGAAGGGTCTCTTAATCCCTATGCTGATGATCCCTACGCATTTGATTAG 2655 0.3842 MQKKLAFPVSKSLDQFKSLYGSISGASKPLSSRPSVDTVSSGSFANLKLTAEKLVKEQASAKTDLENANAKLKKSQECVRALEEKLQNALNENAKLQVKQKEDEKLWKGLESKFSSTKTLCDQLTETLQKLAGLVQDAEKDKETLENKLSASSKTLDSLSKQMDGLSLKLDSAQETIRTRDNELEKLKFASEEKEKFHRDEHCRVANVIEEKDNMIRNFEEILASSRLATENLNSTLEEVHLQLKVKEDEIMRHINSQEKLEKEKSDLQLLNAGLAEKHEMSLQEIENLKETLQSLAADLSNLDKESLNLLSKFDEMNLLYASCFQLVQKERETFSKHAQYQYSELNNKSVVLELEKNATQMKNYELNKTVDELRKVQESTVAQRTEDSRLAAERIQSLVSETETLVSKKKEAEVLISKLEEKVELLLESSRSSDNHVQDLLLKVSAIETESKENTERLQAEILKKSEEIDTLQKERIKLEKHADSLGQEVIQLHNALEEKEQCVLHCKEQEKKLQDQITENTSLLTAVESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINDIKRKYELEKMEIVNMEKDKTDKTITEIEGRCDKKIAECNEESRQQLMRIQEENTLLVNQMQQEHDKRQLSLISEHNEQLKRTQLLAENELREKTIFMRNDHEAQIKALRCELEDECRKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSCGGKRNLQRDLDSPYFEATQTPVPKLLTKVDNIKTGSAVSIPKRHRKQVTRHEYEVETSNGRTITKKRKTRSTVMFEACICFSLNSINHLYIWDPRNRKINTPKVNTPGSVVKSIKGGGHTNPSNIGDLFSEGSLNPYADDPYAFD 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01850 884 Coils Coil 640 660 - -
Vimu1g01850 884 Coils Coil 121 176 - -
Vimu1g01850 884 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 31 731 - -
Vimu1g01850 884 Coils Coil 244 306 - -
Vimu1g01850 884 Coils Coil 666 686 - -
Vimu1g01850 884 Coils Coil 456 490 - -
Vimu1g01850 884 Coils Coil 526 546 - -
Vimu1g01850 884 Coils Coil 566 586 - -
Vimu1g01850 884 MobiDBLite consensus disorder prediction 855 869 - -
Vimu1g01850 884 Coils Coil 403 430 - -
Vimu1g01850 884 MobiDBLite consensus disorder prediction 840 871 - -
Vimu1g01850 884 Coils Coil 51 106 - -
Vimu1g01850 884 Coils Coil 607 627 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01850 - - gmx:100788684 1389.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01850 1 22644363 22661587 Vimu1g01850 1 22644363 22661587 ECH