Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01848 ATGGTCTCCTTTCACAAAGCGTTGTCTGAGACCCCCATAACAGAAGTTCCTGCAGAATTTGAATCTCCACCAAGAAAGAGAAAGTGCCAAGAAGAGACCCTCACTGAAGAATTCTTCAAGATTCACCCAACTGATGCAGAGAAACGAAAATCCATCTTTGGTATAGAGCTTCACCTCGAGACACCATTACCTTCGCATAAATTGCGACAATACCTCACTATTCAGTCAGGGCAGATACACTTGAACAACGCAGGGATGGGTATGATGAAGACACCAGATTTGGAGAGAAACTCTGATCCTAAAGCATCATCACTTGGTCAAATGAGCCTGGACCTGGAGCTGTCACTGAAGAAAAAAGAAGAAAGCTATGACATAAATGAGAAGAACCGTGGTTCGACCTGGAGCACTTTTGGTGAGCATGATCTGTTGATTGAATCAAGCAAGTGTGATAAAATGGATGATTGGCTCTCATCAGAGGGAGATCAGAAGGAGATGATTGCAACGGTTTGTATGAGGTGTCACATGTTGATAATGCTGTGCAAGTCATCCCCTACTTGTCCAAACTGCAAATTCATGCACCCACCGGATCAGAACCCTTCCAAATTCCTCAAGAGGAAGAAGGTGGAGCCTCTCTCATGCTAA 642 0.4424 MVSFHKALSETPITEVPAEFESPPRKRKCQEETLTEEFFKIHPTDAEKRKSIFGIELHLETPLPSHKLRQYLTIQSGQIHLNNAGMGMMKTPDLERNSDPKASSLGQMSLDLELSLKKKEESYDINEKNRGSTWSTFGEHDLLIESSKCDKMDDWLSSEGDQKEMIATVCMRCHMLIMLCKSSPTCPNCKFMHPPDQNPSKFLKRKKVEPLSC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01848 213 PANTHER BOMB/KIRA PROTEINS 130 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01848 Vimu-Chr1 22461622 22462521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01848 - - gmx:100784445 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01848 1 22461622 22462521 Vimu1g01848 1 22461622 22462521 ECH
Vimu1g01848 1 22461622 22462521 Vimu10g02521 10 36436863 36437651 PCT