Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01834 ATGAAGGGAGAGACGGCGACGCTGGTGCTGGTGAACCTGGCGGCGATAATGGAGAGGGCGGATGAGTCACTGCTTCCGGGAGTATACAAGGAAGTGGGAGCTGCGCTTCACACCGACCCCACCGGCCTCGGTTCTCTCACTCTCTTTCGATCCATCGTTCAATCCTCCTGCTACCCTATCGCCGCCTACCTCGCCGTCCGCCACAACCGCGCACATGTCATCGCCCTGGGCGCTTTTCTCTGGGCCGCCGCCACCTTCCTTGTTGCATTCTCCTCCACTTTCTTCCAGGTAGCTTTGTCACGAGCATTTAATGGAATTGGCCTTGCGCTTGTAGCACCTGCAATCCAGTCTCTTGTTGCTGACTCAACTGATGACAGCAATCGTGGCATGGCTTTTGGATGGCTTCAACTAACAGGCAATGTTGGTTCGATTATTGGTGGCCTCTTCTCAGTGTTGATAGCCCCAATAACTGTGTTTGGAATCCCTGGTTGGAGAATTTCCTTTCACATTGTTGGACTAATAAGCATTATAGTAGGTGTTTTAGTATACCTCTTTGCCAATGACCCACACTTCTCAGATAATGGTAGAAATGATAGGAGGCAAGCTCCAAATAAAACATTTTGGTCTGAAGTGAAAGATCTGGTTGAGGAGTCCAAGTCAGTTTTGAAGATTTCGTCTTTTCAGATTATTGTTGCACAGGGTGTCACTGGCTCCTTTCCCTGGTCTGCTTTATCATTCGCACCAATGTGGTTAGAGCTTACTGGCTTCACCCACAACAAAACTGCTTTCCTCATAGCTCTGTTTGTTGTTGCCAGTTCTATTGGGGGATTGTTTGGAGGTAAGATGGGAGATATTCTCTCCAAGCATCTTCCAAATTCTGGGAGAATAATTCTGGCTCAGATAAGCTCTGGATCAGCCATCCCCTTAGCAGCACTTCTTTTGCTTGGTTTGCCGGATGATCCCTCCTCAATAGTGTCTCATGCTTTGGTTCTAATAATTATGGGGCTCCTGATTTCTTGGAACGCTCCTGCTACAAATAATCCAATTTTTGCAGAGATAGTTCCAGAGAGATCCCGAACAAGTGTATACGCCTTGGACAGATCTTTTGAGTCTATATTATCATCGTTTGCTCCCCCTGCAGTGGGGATTTTGGCTCAACATGTTTATGGGTATAAGCCCCTTCCTGAAGGGTCTAGTGAATCTCAAGAGATTTCGACAGACAGAGAGAACGCAGCATCATTGGCTAAGTCTCTTTACACAGCCATAGGAATCCCAATGGCTCTCTGCTGCATAATCTACACATTTCTTTATAGAACATATCCAAGAGACAGGGAACGAGCTAAGATGAAAGCTTTAATAGAATCAGAGATGGAATTAATTGAATCAGGTGCTTTAGACATGGATAAAGAGTTTGAGTCAGAAGAATTATCTATTGCAGAGTTTGAGTATGATGGTGATGGCGATCTTGATGGAGAAGATAACCAATTACTCTACCGGCAGTTGACATTTTCCAAAGAATAA 1521 0.4576 MKGETATLVLVNLAAIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQSSCYPIAAYLAVRHNRAHVIALGAFLWAAATFLVAFSSTFFQVALSRAFNGIGLALVAPAIQSLVADSTDDSNRGMAFGWLQLTGNVGSIIGGLFSVLIAPITVFGIPGWRISFHIVGLISIIVGVLVYLFANDPHFSDNGRNDRRQAPNKTFWSEVKDLVEESKSVLKISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFTHNKTAFLIALFVVASSIGGLFGGKMGDILSKHLPNSGRIILAQISSGSAIPLAALLLLGLPDDPSSIVSHALVLIIMGLLISWNAPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGILAQHVYGYKPLPEGSSESQEISTDRENAASLAKSLYTAIGIPMALCCIIYTFLYRTYPRDRERAKMKALIESEMELIESGALDMDKEFESEELSIAEFEYDGDGDLDGEDNQLLYRQLTFSKE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01834 506 Gene3D MFS general substrate transporter like domains 2 395 IPR036259 -
Vimu1g01834 506 SUPERFAMILY MFS general substrate transporter 7 445 IPR036259 -
Vimu1g01834 506 PANTHER SPINSTER 6 458 IPR044770 -
Vimu1g01834 506 Pfam Major Facilitator Superfamily 13 378 IPR011701 GO:0022857|GO:0055085
Vimu1g01834 506 CDD MFS_spinster_like 8 433 IPR044770 -
Vimu1g01834 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 444 IPR020846 GO:0022857
Vimu1g01834 506 FunFam Major facilitator superfamily protein 1 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01834 Vimu-Chr1 22163915 22166931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01834 - - gmx:100783378 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01834 1 22163915 22166931 Vimu1g01834 1 22163915 22166931 ECH