Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01680 ATGGAACAAACCCAGCCTCCGACCTCCAAGATCTCAACGGTGGTGCCGGCAACCCCACGCGGCGACGAACAGACTGAGTGGCAGCTCAGCTCCATGGACCTGCTCCTGAAGCTCCACTACATCAGAGCCCTCTACTTCTTCGACAACCACGCTGCTCAGAGACTCTCCATCTACGACCTCAAGAAACCCATGTTCCCACTCCTCGACCATGTCACCCATCTCTCGGGTCGGATCCGCATCTCCGAGTCGGGTCGACCCTTCATCAAGTGCAACGACGCCGGTGTCCGCATCGCCGAGTCTCACTCCCACCTCACCCTTCGGGAATGGTTTCATCAAAACGGCTCCTCCCTTCATCACGTTCTTCTCCCCGATCATGTGCTTGGTCCTGACCTAGGTTTCTCCCCTTTGGTCTTTCTTAAGTTCACTTGGTTCAAATGTGGAGGGCTTTCTGTGGGACTTAGTTGGTCCCATGTTCTTGGAGATGCTTTTTCGGCTTTCAATTTCATCACCAAGTGGAGTCGAATACTCGCGGGTCACGCGCCACCCAAAACCCTTCACGTCACACATCACAGACCAACTCCATCCCCACCACACAACAATGGGAATCATGGGAATCCCATTTCCGTTAAAATGGCCACAACCGTAGAGGACCTTTGGCTCGCCACAAACGACACCAAGATGCTTACTCACACTTTCCACGTTACTCCCAACCAGCTTGACCATCTTGTAACGTCCATGTTCACAAGCGACCAAAACCAAGCCAACGATACCTCGTACTTCGAGATTCTATCGGCTCTGGTGTGGAAACACGTGGCACGCATCAGAGACTCGGAGCCAAAGATAGTGACAGTTTTGACACGTGGCGGTGGCTCGGATGACTTTCCGAGCAATGACGTGGTTATAAGTGTGGTTGGAGCAGACGTGGCGGTTGGAAAATCTGACGTGGCGGATTTGGCGAAGCTGATTGGTGAGGTGAAAAGGGTTGAGAATGGCGTTGTGGAGAAGTTGGTGGAAGAGAAGGAAGGGAAAGAGAATTTGGTGGTTTATGGAGCAAGATTGACGTTTGTGGATTTGGAAGAAGATGGTATTTACGAGGTTGTTTTGAACGGAGAGAAACCGGTTGTGGTGAATTGTGGAGTTGGTGGGGTGGGTGAAGACGGTGTCGTTTTGGTGCTGCCGGGATTGCAAGACGAAGAAAATGGGAGGAGTGGGAGAATGGTGACTGTTACTTTGCCTGAAAAAGAAGTTGAGCAGCTCAAAGAGAAGCTAAGAGAAGAATGTGGTATTCATTCACTTGCATTTTGA 1305 0.5119 MEQTQPPTSKISTVVPATPRGDEQTEWQLSSMDLLLKLHYIRALYFFDNHAAQRLSIYDLKKPMFPLLDHVTHLSGRIRISESGRPFIKCNDAGVRIAESHSHLTLREWFHQNGSSLHHVLLPDHVLGPDLGFSPLVFLKFTWFKCGGLSVGLSWSHVLGDAFSAFNFITKWSRILAGHAPPKTLHVTHHRPTPSPPHNNGNHGNPISVKMATTVEDLWLATNDTKMLTHTFHVTPNQLDHLVTSMFTSDQNQANDTSYFEILSALVWKHVARIRDSEPKIVTVLTRGGGSDDFPSNDVVISVVGADVAVGKSDVADLAKLIGEVKRVENGVVEKLVEEKEGKENLVVYGARLTFVDLEEDGIYEVVLNGEKPVVVNCGVGGVGEDGVVLVLPGLQDEENGRSGRMVTVTLPEKEVEQLKEKLREECGIHSLAF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01680 434 Gene3D - 221 423 IPR023213 -
Vimu1g01680 434 MobiDBLite consensus disorder prediction 193 207 - -
Vimu1g01680 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 394 - -
Vimu1g01680 434 Pfam Transferase family 12 285 - -
Vimu1g01680 434 Gene3D - 8 204 IPR023213 -
Vimu1g01680 434 MobiDBLite consensus disorder prediction 184 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01680 Vimu-Chr1 16941381 16945171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01680 1 423 Acyl Lipid Metabolism Gene Families AT4G24510 40.046 1.43e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01680 - - gmx:100814097 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01680 1 16941381 16945171 Vimu1g01680 1 16941381 16945171 ECH