Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01678 ATGGTTAAAGAGGTTAACAAGCAAAGAAGGGTTAAGGTTCCTTTCAGCGCAGAAGACACTGCTTCTCTGTTGCAAAGATACGATGCACCAACGGTTTTGACGTTGCTTCAGGAATTGGCCAATTATCCGTATTCCAAGTTTAACTGGAATGATTTGGCGGCCAAAACATCAACCGGAATTTCTAATGCTAGAGAGTATCAAATGCTGTGGCGACATTTGGCGTATGGTCACTCCATGGCAAATTTGGATGACGATGCTCAACCTTTGGATGATGACAGTGACTTGGAGAGTGAACGAGAAGCATTACCTCGCTTAAACAAGGAAACTGCAACCGAAGCTGCAGCATTTGTTAAGGTAATTATTGCATCTTTTAAACTGGGTGAATCCAGTGCTACTAGTTCAGTGATTCAAGCTCCGTTGACTATAAATACTCCCTCTACCATTGATAAGAATGAAAGTTCGAGCAACACCGATATTATTTTTCCAGTAACAGTGAAGAGACAGACACTGCCAAATACATCATCAACAAGAGTAGTCAGAAGTAGCACATCTATTAAAAAGAAAAGAGAACCATGGTCAGAGCAAGAGGACCTGCAATTACGAGATGCCGTTCAGAAGTGGGGTGAA 627 0.4195 MVKEVNKQRRVKVPFSAEDTASLLQRYDAPTVLTLLQELANYPYSKFNWNDLAAKTSTGISNAREYQMLWRHLAYGHSMANLDDDAQPLDDDSDLESEREALPRLNKETATEAAAFVKVIIASFKLGESSATSSVIQAPLTINTPSTIDKNESSSNTDIIFPVTVKRQTLPNTSSTRVVRSSTSIKKKREPWSEQEDLQLRDAVQKWGE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01678 209 MobiDBLite consensus disorder prediction 183 203 - -
Vimu1g01678 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 184 209 IPR017930 -
Vimu1g01678 209 MobiDBLite consensus disorder prediction 172 209 - -
Vimu1g01678 209 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01678 Vimu-Chr1 16889973 16894160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01678 - - gmx:100819057 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01678 1 16889973 16894160 Vimu1g01678 1 16889973 16894160 ECH
Vimu1g01678 1 16889973 16894160 Vimu10g02600 10 37425638 37426584 PCT