Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01658 ATGGTTTGGCCAATTAGGTCCACAATAAGTTCACTTCTATGTGCAAATTCACCTTTAGTGGCTTCACATGTCTATGAATCATGGTGGTTCTCACGCTTTTCGGGTCCAACCAGCTCCTCCTTAACAAGGCCTTGGCCAAAAGTTATGGATTGGATTCATATGGATCGTTGCCGTACAGCAGCATCATTGCCTTCGATCAAGGAGAAACAAACAGAGAGTCCTGATTATTGTGTTAGACTCAATGGAGAAAACCAAGACAGTAAAGAGTTGGAGCATTTCCAAGCTCTTGCTGAAGCTCAATCTCCAAAGTTTATGGTAATTGCTTGTGCAGACTCTAGGGTATGCCCCTCTAACATATTAGGATTCCAACCTGGAGATGCCTTTATGATACGTAACATTGCCAATCTTGTCCCGCCCATGAAGAATGGACCATCAGAATGTAATGCTGCCCTTGAGTTTGCAGTAACTACTCTTCAGGTTGAGAATATATTAGTCATTGGTCATAGTAGCTGTGCTGGAATTGAAACATTGATGAATATGCAAGATGATGCAGAATCAAGAAACTTCATACAGAAGTGGGTTGCCACTGGAGAACTTGCCAAACTGAAGACAACAGCTGCCACAGCTCATCTTAGCTTTGATCAGCAATGCAGATTCTGTGAGAAGGAATCTATTAACCAATCATTACTGAACTTGCTCAGTTATCCTTGGATAGAAGATAGAGTAAGAAGAGAGTTGCTTTCTCTTCATGGAGGATACTATAATTTCAACAATTGCTCTTTTGAGAAATGGACCCTTGATTTTGAAAGATGCAATGTTAAAGAAGAAGGGATCAGTTATGTTGTGAAAGAACAAGATTTCTGGAGCTGA 870 0.408 MVWPIRSTISSLLCANSPLVASHVYESWWFSRFSGPTSSSLTRPWPKVMDWIHMDRCRTAASLPSIKEKQTESPDYCVRLNGENQDSKELEHFQALAEAQSPKFMVIACADSRVCPSNILGFQPGDAFMIRNIANLVPPMKNGPSECNAALEFAVTTLQVENILVIGHSSCAGIETLMNMQDDAESRNFIQKWVATGELAKLKTTAATAHLSFDQQCRFCEKESINQSLLNLLSYPWIEDRVRRELLSLHGGYYNFNNCSFEKWTLDFERCNVKEEGISYVVKEQDFWS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01658 289 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vimu1g01658 289 SMART Pro_CA_2 97 265 IPR001765 GO:0004089|GO:0008270
Vimu1g01658 289 FunFam Carbonic anhydrase 78 273 - -
Vimu1g01658 289 Pfam Carbonic anhydrase 105 258 IPR001765 GO:0004089|GO:0008270
Vimu1g01658 289 SUPERFAMILY beta-carbonic anhydrase, cab 87 271 IPR036874 GO:0004089|GO:0008270
Vimu1g01658 289 Gene3D Carbonic anhydrase 78 274 IPR036874 GO:0004089|GO:0008270
Vimu1g01658 289 PANTHER CARBONIC ANHYDRASE 87 269 IPR001765 GO:0004089|GO:0008270
Vimu1g01658 289 CDD beta_CA_cladeB 88 264 IPR045066 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01658 Vimu-Chr1 16484561 16486720 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01658 K01673 - gmx:100812124 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01658 1 16484561 16486720 Vimu1g01658 1 16484561 16486720 ECH