Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01407 ATGAAAACATCTAAGGAGATTTCAGATTTGGAGGGGGAGCTTTCATCTATTAGAAACCTGCTCTCTACACAAGCTGGCTTGATACATGGTTTAGCTGAAGGAGTTCACATCGAAGCATTATCAATTTCAAATTCTGATGGTTTTTCTTCAAATGCTACATCAGATTCTGAAGATAAGGAAATATCAGACCTAGACAAATGGTTGGTAGAGTTTCCTGATCTCTTGGATGTTCTCTTGGCTGAAAGGCGAGTGGAAGAGGCTTTGGCTGCTCTCGATGAAGGAGAACGTGTAGTTTCTGAGGCTAAAGAGATGAAATCTATCACCCCGTCTGTACTTTTGTCTCTACAGAATTCCATTGCTGAACGTAGACAAAAGCTAGCTGATCAGCTAACTGAAGCTGCTTGTCAGCCCTCCACACGTGGTGCTGAGCTACGTGCATCAGTTTCTGCCCTTAAAAGACTTGGAGATGGTCCCAATGCCCACAGCTTGCTACTTAATGCCCATCAACAGCGGTATCAATATAATATGCAAAGTCTTCGACCATCAAGCACCTCATATGGTGGAGCATATACTGCTGCTCTAGCCCAACTGGTATTCTCTGCAGTTGCTCAAGCTGCCAGTGATTCTTTGGCTATTTTTGGTGAAGAGCCAGCTTATACTTCGGAACTTGTCATGTGGGCTACAAAGCAAACAGAGGCCTTTGCTCTTCTGGTGAAAAGGCATGCATTAGCTTCATCAGCAGCTGCAGGAGGTTTAAGAGCTGCTGCAGAGTGTGTTCAAATAGCTCTGGGTCATTGCTCATTGTTGGAAGCTCGTGGTCTAGCCCTCTGTCCTGTGCTGTTGAAACTTTTTAGGCCTAGTGTTGAGCAAGCACTTGATGCTAATTTGAAACGAATTCAAGAGAGTACTGCTGCTTTGGCTGCGGCTGATGATTGGGTGCTTACATACCCTCCTACAGCTAGTCGTCAGAGTAGTAGGCCTTCAAGTATATCCATTAGTAATACAACAGCATTTCAACATAAACTTACAAGCAGTGCCCATCGCTTCAATTTGATGGTCCAGGTGAGAATTTCAGTTTTGACTTGTTAG 1089 0.4417 MKTSKEISDLEGELSSIRNLLSTQAGLIHGLAEGVHIEALSISNSDGFSSNATSDSEDKEISDLDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSITPSVLLSLQNSIAERRQKLADQLTEAACQPSTRGAELRASVSALKRLGDGPNAHSLLLNAHQQRYQYNMQSLRPSSTSYGGAYTAALAQLVFSAVAQAASDSLAIFGEEPAYTSELVMWATKQTEAFALLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIQESTAALAAADDWVLTYPPTASRQSSRPSSISISNTTAFQHKLTSSAHRFNLMVQVRISVLTC 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01407 362 Pfam Exocyst component 84 C-terminal 66 275 IPR032403 -
Vimu1g01407 362 Coils Coil 84 104 - -
Vimu1g01407 362 Gene3D - 187 291 IPR042560 -
Vimu1g01407 362 PANTHER EXOCYST COMPLEX COMPONENT 8 2 354 IPR033961 GO:0000145|GO:0006887
Vimu1g01407 362 Gene3D - 52 175 IPR042561 -
Vimu1g01407 362 FunFam Exocyst complex component EXO84B 55 178 - -
Vimu1g01407 362 FunFam Exocyst complex component EXO84B 187 291 - -
Vimu1g01407 362 SUPERFAMILY Cullin repeat-like 58 292 IPR016159 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01407 K19986 - gmx:100820599 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01407 1 11786516 11795581 Vimu1g01407 1 11786516 11795581 ECH