Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01197 ATGGGAGTGCTTTCCAATATGATCGACCGTGAAAATCTGAAACTCGGTGATCACATTTACTCTTGGAGGCAAGCCTACATCTATGCGCACCACGGAATATATGTTGGCTGTGGAATGGTGGTCCACTTTACCAGAGGAGCAGGTCAAGAAATTGGAACAGGGACTGTGTTGGACAATTTCCTTTTAAGTTCATCTCCCACTCATTCTATTGACACTCCATGCCCAATATGTGCTGACCAAACTAGGACCGATGGTGTCTTATGTTCCTGTTTGGATTGTTTTCTTTCTGGTGGTAATCTATACATCTTTGAGTATGGGGTATCACCTGCATTTTTTCTAGCCAAAGCTCGAGGAGGTACCTGCACTCTTGCTCCATCTGATCCAGTTGAAGATGTCCTTCATCGTTCTTCATTTCTTCTCGAAAATGGGTTTGGTGGCTACAATGTTTTCAAGAATAACTGCGAAGACTTTGCAATTTACTGCAAAACAGGCTTGCTTGTGTCCACAAACATCAGTGTTGGTCGCAGTGGGCAATTGGCATCTTACGTATCTGCTGCTAGTACTGTAGTTTCCACAACGCTTCGTTTTATGACCACCAGTTTCAGTGGTTTGGCATTGGTTAGTGTTGGCATGTACTGTGTTGGAAGGTTGGTGTCTGATATTGGAGTACGCCGTGATGTGCTGAAAGTTCCAGTGGAAAGGCTTACAGCTACACCTGGCCTGGATATATCAGAGAGGACAACTGAGATGGCCAAGGAAGATTAA 765 0.4444 MGVLSNMIDRENLKLGDHIYSWRQAYIYAHHGIYVGCGMVVHFTRGAGQEIGTGTVLDNFLLSSSPTHSIDTPCPICADQTRTDGVLCSCLDCFLSGGNLYIFEYGVSPAFFLAKARGGTCTLAPSDPVEDVLHRSSFLLENGFGGYNVFKNNCEDFAIYCKTGLLVSTNISVGRSGQLASYVSAASTVVSTTLRFMTTSFSGLALVSVGMYCVGRLVSDIGVRRDVLKVPVERLTATPGLDISERTTEMAKED 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01197 254 Pfam Lecithin retinol acyltransferase 12 166 IPR007053 -
Vimu1g01197 254 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 173 - -
Vimu1g01197 254 ProSiteProfiles LRAT domain profile. 20 170 IPR007053 -
Vimu1g01197 254 PANTHER OS05G0310600 PROTEIN 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01197 Vimu-Chr1 9317935 9321338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01197 - - gmx:100784269 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01197 1 9317935 9321338 Vimu1g01197 1 9317935 9321338 ECH