Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01164 ATGTTGAAGCTTATACTAGTGTTATACATGACAGATGAAGCTCGTGTGAAGGAGTTTGGCCTGAAGCATATGTGGAAGAGTCCAAATGGGACAATTAGGAACATTTTGAATGGAACTGTCTTCAGAGAACCAATTCTTTGCAAAAACATTCCGCGCCTAGTTCCTGGTTGGACAAAGCCAATATGCATCGGAAGACATGCATTTGGTGACCAATATCGGGCTACTGACACAGTAATTAAAGGAGCTGGAAAGCTGAAGCTGGTGTTTGTTCCAGAAGGCCAAGGTGAGAAGACTGAATTAGAGGTTTTTGACTTTACTGGTGAGGGAGGCGTTTCATTGGCTATGTACAATACTGATGAGTCAATTCGTTCTTTTGCCGAGGCTTCTATGGCAACTGCTTTAGAGAAAAAGTGGCCTCTTTATCTTAGCACCAAAAATACAATTCTTAAGAAATATGATGGAAGATTCAAGGACATATTTCAGGAAGTTTACGAGGCAAGCTGGAAATCAAAGTTTGAGGCTGCTGGTATATGGTATGAACATCGGCTCATTGATGATATGGTGGCTTATGCACTCAAGAGTGAAGGAGGTTATGTATGGGCATGCAAAAATTATGATGGTGATGTGCAGAGTGATTTCTTAGCTCAAGGTTTGTCTGATATGCTTATTAACTAG 675 0.4089 MLKLILVLYMTDEARVKEFGLKHMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGQGEKTELEVFDFTGEGGVSLAMYNTDESIRSFAEASMATALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGLSDMLIN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01164 224 Gene3D Isopropylmalate Dehydrogenase 6 219 - -
Vimu1g01164 224 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 11 217 - -
Vimu1g01164 224 SMART Iso_dh_2 1 224 IPR024084 -
Vimu1g01164 224 Pfam Isocitrate/isopropylmalate dehydrogenase 12 217 IPR024084 -
Vimu1g01164 224 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 11 219 IPR004790 GO:0004450|GO:0006102
Vimu1g01164 224 NCBIfam isocitrate dehydrogenase (NADP(+)) 11 219 IPR004790 GO:0004450|GO:0006102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01164 Vimu-Chr1 8945788 8947123 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01164 K00031 - gmx:100791166 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01164 1 8945788 8947123 Vimu1g01164 1 8945788 8947123 ECH