Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01156 ATGGAAAAGACACATACTGTGGGAGTAGCCATGGACTTTTCTCCCACTAGCAAGTTAGCACTTCGTTGGGCAGTTGATAATCTCATCAACAAAGGTGATGAAATCATCTTGATCAATGTTCAGCCTCCCCAAGCTCATCACACCAGAAAGGAGCTTTTTGAGGACACTGGTTCACCTTTGGTGCCTTTGGAGGAACTGAGGGAGTTGAATTTTACTAAGCAGTATGGGATTGCAAGGGATCCTGAAGTCATAGATCTGCTTGATACTGCCTGGAAGACAAAAGGGGCAAAAACAGTGGCAAAGGTGTATTGGGGAGATCCAAGGGAGAAATTGTGTGATGCTGTGGAAGATCTTCACCTTGACTCTCTGGTTCTTGGAAGCAGAGGTTTGGGTCCCATTAAAAGTGTAAGCAAGCATGTCATGACAAATGCCTCTTGCCCCGTCACTGTGGTTAAGGCAAAACAATCTTCCAATTCCCGTCATTGA 486 0.4527 MEKTHTVGVAMDFSPTSKLALRWAVDNLINKGDEIILINVQPPQAHHTRKELFEDTGSPLVPLEELRELNFTKQYGIARDPEVIDLLDTAWKTKGAKTVAKVYWGDPREKLCDAVEDLHLDSLVLGSRGLGPIKSVSKHVMTNASCPVTVVKAKQSSNSRH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01156 161 Pfam Universal stress protein family 5 152 IPR006016 -
Vimu1g01156 161 Gene3D HUPs 2 161 IPR014729 -
Vimu1g01156 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 152 - -
Vimu1g01156 161 CDD USP_Like 6 151 - -
Vimu1g01156 161 PANTHER IMP2'P 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01156 Vimu-Chr1 8886068 8886868 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01156 - - gmx:100500682 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01156 1 8886068 8886868 Vimu1g01156 1 8886068 8886868 ECH