Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01155 ATGTCACACTCACACCTCAACAACTGGTTTTCTGACCATTCCAGCTCCATGGAATTGGAAATTGGAGCCACTGATGCAGATCAAACAATTGAACCTTGGTTTCAATCTGATACATCTTCTGGGTACCTTCAAGATGCCATTCAAGATGCCATTTGGTGCAAGGACCAAAATTTACCATCCTGCCATCAAAAGGTAGAACAATTTCCAATATTCTCCACAACAGTTCCACCTCTTCATGGCTCATCAGCAGTTTGTTCTTTCGTTTTTCCTCAACTGTTTGATGCAAATTCTGTGGCAAAGTGTATGAAGTTTGGTGGAGTCTGGAATCTGGAATCGAGCATCAGTAGGAGCCTGTCATCAACAACACTAGGTGATGCACATGAAGCTGCCATCAAACAAGATCCTGCTCAAAATAGTTATACATCTGCAGGTCAACGGAAGAAAATTGCTTACCCGTTTAAGTTAGTGAAGTGTGGAGGAGTTGAAGGGGAAACAACACTGAAAGATATCAATTACCAAATTCTGACGACACCATCAACATCAAAGCCAATTCCTCATCCTGTGACAGATTCTTCTGTGACTCTTCCATGCAAATTAGTCAAAGGAAGTTTTGGTTTGTCTGGAAAAACAGTTACGTCCCTCACCAGGATTCATACTAGGGGAAGAGGTTCCATTACCATTATTAGGACCAAGGATTGA 699 0.4177 MSHSHLNNWFSDHSSSMELEIGATDADQTIEPWFQSDTSSGYLQDAIQDAIWCKDQNLPSCHQKVEQFPIFSTTVPPLHGSSAVCSFVFPQLFDANSVAKCMKFGGVWNLESSISRSLSSTTLGDAHEAAIKQDPAQNSYTSAGQRKKIAYPFKLVKCGGVEGETTLKDINYQILTTPSTSKPIPHPVTDSSVTLPCKLVKGSFGLSGKTVTSLTRIHTRGRGSITIIRTKD 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01155 232 PANTHER PROTEIN XRI1 28 231 IPR039933 GO:0007140|GO:0007143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01155 Vimu-Chr1 8881602 8882814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01155 - - vra:106763340 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01155 1 8881602 8882814 Vimu1g01155 1 8881602 8882814 ECH
Vimu1g01155 1 8881602 8882814 Vimu1g01155 1 8881602 8882814 PCT