Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01152 ATGGAGATACAGACATGTGGCAAGCCAATTGACTCCTTGCTAGAAAAGGTTCTGTGCATGAATATTCTGTCATCTGATTACTTTAAGGAACTCTATCGATTAAAAACGTATCATGAAGTTATTGATGAGATCTATAATCAAGTTGATCATGTGGAGCCGTGGATGACTGGCAATTGTCGCGGCCCTTCTACTGCTTTCTGTCTTCTTTACAAATTTTTTACGATGAAGCTCACAGTGAAGCAAATGCACGGGCTGTTGAAACACCCCGATTCTCCTTACATTAGAGCGGTTGGGTTTCTCTATTTGAGATATTGTGGAGACCCAAAGACACTATGGAGTTGGTTTGAACCGTATATAAAAGACGAGGAGGAATTTTCTCCTGGATCTAATGGTCGAATGACTACAATGGGTGTATACATCCGTGATTTGCTACTTGGACAGTATTACTTCGACACACTGTTTCCTCGCATCCCCGTTCCTGTATTGCGGCAGGTTGTGTCTAATCTTGAAAAGTTGAAGCTCCCCACTACACATTCTGGTTCGACTGGGGAATCTACCCGTCATGGTTCTGATGATACTGCCCGCAGACCACCTTCGGTTAAAGCTGCTCTTTCAGTCTCTTTTGGTCAGCGAGCTCCACATCGTGCCTCCACAAGGGATTCTTCACCTATTCGCCGTACATTACCTTCTCATGAAAGAAATGGCAGTGATGACATTAGAAGATCTCCAAGTAATCGCCGCAGCCAAAGCCGGGAATATCCTGATAGGGATAGGGATAGGGATCGTGAGCGGTCACGGTCCAGAGACAGGGATAGGGATCATGATAGGGATAGGGAAAGGGAGAGGGACAGGGATCGAGAACGTGATAGGGACAGATACCGTGATAGAGATAGAAACAGGGAGTGGGAGCGTGATCGAGACCGGGAAAGATACAGGGATCGTGACTCAGACCGAGATCAGGAGAGGGACAGAATCCGAAGGGATAAGGAGCGGGAAAGAGAGAGGAGTTATGATTATGATAGGAGGTCTAAGCACACAGAAAGAGAAAGCAGCCGGGATTATGACAATGGTAGCCGGCACTATCGTAAGAGTCGGAGTAGAAGTAGAAGCAGAAGTAGGAGTCAGAGCCAGCAAGCCGGCACTGCTCGTTATGAATCACGTTCTAGTCCACCAAGAGATGGGAGTAAAAGAACTTCTGCATCCAGTAATCTAGCTAAACTTAAAGATATGTATGGTGATTTAGGGGATAATAAAGGAGAAATCCGCATGGAAAAAATTCCTAGAAAGGATAGTGGAGGAGAAGAGGTCATCAGACTTGGCGGTTCTACTTGGAAGTATTGA 1341 0.4571 MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCGDPKTLWSWFEPYIKDEEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSGSTGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPSHERNGSDDIRRSPSNRRSQSREYPDRDRDRDRERSRSRDRDRDHDRDRERERDRDRERDRDRYRDRDRNREWERDRDRERYRDRDSDRDQERDRIRRDKERERERSYDYDRRSKHTERESSRDYDNGSRHYRKSRSRSRSRSRSQSQQAGTARYESRSSPPRDGSKRTSASSNLAKLKDMYGDLGDNKGEIRMEKIPRKDSGGEEVIRLGGSTWKY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01152 446 MobiDBLite consensus disorder prediction 218 361 - -
Vimu1g01152 446 Pfam PRP38 family 11 161 IPR005037 -
Vimu1g01152 446 MobiDBLite consensus disorder prediction 371 385 - -
Vimu1g01152 446 MobiDBLite consensus disorder prediction 411 435 - -
Vimu1g01152 446 PANTHER UNCHARACTERIZED 11 322 IPR005037 -
Vimu1g01152 446 MobiDBLite consensus disorder prediction 175 446 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01152 K12850 - gmx:100788237 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01152 1 8860597 8865506 Vimu1g01152 1 8860597 8865506 ECH