Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00947 ATGTCTGCTTATGGCCATCAAACGGAGCAGATGTATTCTGCTCACAGTCTCTCTGGTGGTTCTGAGTTGAGGAGGAGCAGTTTTGTGCTGGAATCAGGATTCTATATCACATCCTTTGTTGCAACCATTCTTGTTGCTGCATTAGCCGCTGCCGGGCTTTTATTGATTACTTTATTGGTTTCACTGGCAATGATGCTGCAATCTTGTCAAAGTAGCCATGCTGGAATTGTTGAGCTTCGGAATATAAATGACGAGTACAACTATTGCAAGGTCTATTCTCTGCATGCCAAGCTCAATAACTTGGAAGGACACAATTTTCCTAACCTCTGCAAGGACCTTGCCATAGGGTATATCAAGGGAGGTCAATATGCTAGAGACTTGGATTCAACCAAATCTCTAATGGATGATTATTTCAACTCTGTTAGACCATCAGATGATGATGATCTTGATGTGGTGTTGATAGACATAGATGGAATCGTTTCCCCAAATCTTTATTCTCCTACTTTGTTGCAAAGCATTGACAATTGTATCATAGAGGCAAAGAATTTAAAGCACATGTTTGTTTTAAGATTATACTCCAAGCTTCAAGCTGGTGGATGGTCCATAATTTTGTTATCAAGAGAGTATGTAAAACACCAAAATGTCACCATCAATCATCTTCTCTCTGCTGGATTTAGAGGCTGGTCTTCTTTGATGATGAGAGATGATGCAGATTCTTCCAAAGGGAATGAGTTTTTTTCTAGACAAAGGAATGTGATAAAAACGAAGGGATTCCGCATAAAAAGTGTCATCAGCAGTGAAATGGATGCTTTGAGTGTTGATGACAGAGGAATGAGAGTATTTTTGCTTCCGGACCCTATATTTGACAAGTTTGAACTGCAAACAAGAACATAG 894 0.396 MSAYGHQTEQMYSAHSLSGGSELRRSSFVLESGFYITSFVATILVAALAAAGLLLITLLVSLAMMLQSCQSSHAGIVELRNINDEYNYCKVYSLHAKLNNLEGHNFPNLCKDLAIGYIKGGQYARDLDSTKSLMDDYFNSVRPSDDDDLDVVLIDIDGIVSPNLYSPTLLQSIDNCIIEAKNLKHMFVLRLYSKLQAGGWSIILLSREYVKHQNVTINHLLSAGFRGWSSLMMRDDADSSKGNEFFSRQRNVIKTKGFRIKSVISSEMDALSVDDRGMRVFLLPDPIFDKFELQTRT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00947 297 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 181 289 IPR005519 -
Vimu1g00947 297 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 52 287 - -
Vimu1g00947 297 Gene3D - 83 292 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00947 Vimu-Chr1 6693572 6695314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00947 - - gmx:100802632 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00947 1 6693572 6695314 Vimu1g00947 1 6693572 6695314 ECH
Vimu6g01761 6 16001655 16003396 Vimu1g00947 1 6693572 6695314 PCT