Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00852 ATGGCTTACTACAGATTTCTTGATGTGTTTTCATGGATTCAAAATTGTCCACCAATCACAGAATGGAAAACGGGTTCCATGTCTATGAGCATATGTTACACAAACTCATCTCAACCATCACTAAATCTTATCATAGCAAAAAATCACCACCAATCCTCAAGTCTCTCTTTAGCCATTGTGGCGGATTTCAGCATTCCTATATCTCTTTGGACCTCTAAACCTTTCAAACCTAATACCAAAACCATGAGGTTAACAGATGGTGAAACCATTTCCAATCTCCTTGCTAATTTCATACAAGATATCCTTCACTATGGCTCCAACAAGAAGAATGTTTCCTACATCAAGTTTCCCAAACTTGATTCCATTTCTAACTTCCAAGACATTTTCAACCTTGCTTTCCTCACTCTCTTGTTCCTAGTTTGCATATACGAAGCCCCTTCTGATCTTCGTTGTAGTTGTCTCAGCACTTTGAAAGAACAACTTGCAGGGTGTCGGTCAAGGCAAGCATCGAAGTTACTGATGAAACTCTTGGGTTCCAACTTGGAAGAACAGTGGATGCGTTCCGTGAACCTTGCCATCACAAATTGGATTGTGGAGCTCCAAGAAGCGCATCACAATGGTCAAATCACCCTCAGAACTCCATCACCTCTATTTTCTTATGCATTCTCAGCAGCTGGGTTATGGAAAGTTCAATTATACTGCCCAGTCATAAACATGGATGTTGTGACTGCAAACAACCATCCACCTGATGAGAGGCTTCAATTCTCTCTCAAATATCAACAGCTTGAAGGTGTTCTTCAGTTCAATTACAAAGTCATAATCAAAGACAAATGGGTCGAAATCGTGGTGAACATTGACAACATAAGATGTGATGTTCTGAAATTGGTAGATGACAGTCTGATGAGAGAACGAGGAGCAGGTGCAGCAGAAAAACATTTTCCTTCAAGAATCTCGTTGCAACTTACTCCCACACTTCAACACCAGGTGTTGAGCGTATCAGTTGGGAAATCCTCGGAGAATCCGGTGATAGAGTTTGGAGTGGAGAAAGGAATAGAAGCGTCGTTCGATCCACCGAACCCTTACATGGGAATCAGCGTGTCAGCGGGAGAGTCAACAACTGTGAGCTTAAAGCCATGGAAATTCGAAGAATCTGTTTATGGGTACAGTGCAAATTTGAATTGGTTTCTTCATGATAGCGGCGATGGGAAGGAAGTGTTCTCGTCAAAGCCTTCAAAGGTTGCGATGTTTAACCCAAAGGCGTGGTTCAAAGACAGGTACTCCAGTGCTTATCGCCCTTTCACGAGACAAGGAGGAGTTATTTTTGCACGTGATGAATATGGAGAAAGTGTATGTTGGAAAGTGGATAAAGGTGTTGTGGGGAAGACGATGGAGTGGGAGGTAAGAGGTTGGATATGGTTAACATATTGGCCTAACAAGCACAAGACATTCTACCATGAAACCAAAAGATTCGACTTTCGAGAAACAGTATACCTCAGTATTTGA 1503 0.4198 MAYYRFLDVFSWIQNCPPITEWKTGSMSMSICYTNSSQPSLNLIIAKNHHQSSSLSLAIVADFSIPISLWTSKPFKPNTKTMRLTDGETISNLLANFIQDILHYGSNKKNVSYIKFPKLDSISNFQDIFNLAFLTLLFLVCIYEAPSDLRCSCLSTLKEQLAGCRSRQASKLLMKLLGSNLEEQWMRSVNLAITNWIVELQEAHHNGQITLRTPSPLFSYAFSAAGLWKVQLYCPVINMDVVTANNHPPDERLQFSLKYQQLEGVLQFNYKVIIKDKWVEIVVNIDNIRCDVLKLVDDSLMRERGAGAAEKHFPSRISLQLTPTLQHQVLSVSVGKSSENPVIEFGVEKGIEASFDPPNPYMGISVSAGESTTVSLKPWKFEESVYGYSANLNWFLHDSGDGKEVFSSKPSKVAMFNPKAWFKDRYSSAYRPFTRQGGVIFARDEYGESVCWKVDKGVVGKTMEWEVRGWIWLTYWPNKHKTFYHETKRFDFRETVYLSI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00852 500 PANTHER EXPRESSED PROTEIN 8 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00852 Vimu-Chr1 5756954 5758558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00852 - - gmx:100782905 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00852 1 5756954 5758558 Vimu1g00852 1 5756954 5758558 ECH
Vimu6g01680 6 15412437 15416016 Vimu1g00852 1 5756954 5758558 PCT