Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00771 ATGAGTGCGATCATGAATTATGAAAATGTTGAGGAGTTCTCGGACCGTCTTGCGCAGTTCACATTGGAAGGGAAATGGGATGAAGTTGAGGAGATGTACAATGAATTCCGAGAGTGTCACACGGTAATGATTGACGATTTCGTCGGCACTGCACTGCACGTGGCCGTGGATTTGAACAAAGAAGATGTGGTTGAGAAGCTTGTGAATGCCATTATCAGATACGACACTATGGAGCCTCTGAAAATGAGGAACGATCGAGGGGATACCGCTCTGCATGTTGCTGCTTCCAGGGGAGAGAATGGAGAGAGGACTGACTTAGTGAAACTCAAAAACAAAGAAGGAGAGACTCCTCTCTTTCAAGCCGCTCTCAACTGTAAGAAACCGGCATTTGCTTATCTTTCTAACCTTTTTCACCACAGCGCTCGCTGGCAAGATCTTGTGCGACACAACGGTGACAATATTCTTCACTGTGCTATCAGGAGAGAGTATTTCGATTTGGCTGTGATAATATTGTATTACTATGATTTCCTTGGCATACATTTGAATAACATGGGATTTACTCCTCTTAAAGTCCTTGCAACCAGGCCCTCGGCTTTCAGAAGTGCTACCAAACTTTCATGGTGGAAGAAAATCCTGTACCACTGTATCCTTGTGGAACCAGTGAAACCTGAAAGAGAAATGGAGAAGATTTTGAAGAAGTTGGAGAAGAAATCAAATGACGAAAAATGTAGTTATCCAGAGAATTATACCACATTATGTGAATTCATTGCTGGATTCAAAAGTCTTGGTGTTCTAACTGTTGGCAACAAGAAGACAAAAGGTTGA 825 0.4267 MSAIMNYENVEEFSDRLAQFTLEGKWDEVEEMYNEFRECHTVMIDDFVGTALHVAVDLNKEDVVEKLVNAIIRYDTMEPLKMRNDRGDTALHVAASRGENGERTDLVKLKNKEGETPLFQAALNCKKPAFAYLSNLFHHSARWQDLVRHNGDNILHCAIRREYFDLAVIILYYYDFLGIHLNNMGFTPLKVLATRPSAFRSATKLSWWKKILYHCILVEPVKPEREMEKILKKLEKKSNDEKCSYPENYTTLCEFIAGFKSLGVLTVGNKKTKG 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00771 274 Gene3D - 101 199 IPR036770 -
Vimu1g00771 274 SUPERFAMILY Ankyrin repeat 40 197 IPR036770 -
Vimu1g00771 274 Gene3D - 38 100 IPR036770 -
Vimu1g00771 274 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 24 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00771 Vimu-Chr1 5075672 5076966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00771 44 189 Miscellaneous Gene Families AT3G09550 26.797 7.82e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00771 - - var:108336558 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00771 1 5075672 5076966 Vimu1g00771 1 5075672 5076966 ECH