Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00768 ATGTACAATGATTTCCCAGTGTGTCACACGGCAATGATTGACGATTTCGTCGGCACTGCACTGCACGTGGCCGTGGATTTGGACCAAAAAAATGTGGTTGCGGAGCTTGTGAATGCAATTATCAGACACAGCCAAGGAGCGAGGGTGAAGGCTCTGGAAATGGGAAACGATGGAGGGGATACTCCTCTGCATGTTGCGGCTTCGAAGGCTATTGGAGTGGTAAATGAACTAAAAGAGACAAAAAAGAAGCACCAATTGGGTCCAAGACTCTTGAAGGAACTATTGAAAAGACCTTATGCAGCAATGACGGGAAGAGGAACTGTACCCTATGATATACCAATTGATGCAGATATGTATAATGTGTATAATTTTTATAAAGGTATCTATCTATCTATCTATATAACACTTTTCTAA 414 0.4203 MYNDFPVCHTAMIDDFVGTALHVAVDLDQKNVVAELVNAIIRHSQGARVKALEMGNDGGDTPLHVAASKAIGVVNELKETKKKHQLGPRLLKELLKRPYAAMTGRGTVPYDIPIDADMYNVYNFYKGIYLSIYITLF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00768 137 SUPERFAMILY Ankyrin repeat 13 68 IPR036770 -
Vimu1g00768 137 Gene3D - 9 85 IPR036770 -
Vimu1g00768 137 Pfam Ankyrin repeat 59 95 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00768 Vimu-Chr1 5059615 5061347 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00768 - - vra:106763278 105.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00768 1 5059615 5061347 Vimu1g00768 1 5059615 5061347 ECH